Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
POLR2JP52435 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
POLR2JP52435 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2JP52435 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
POLR2JP52435 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2JP52435 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.22■□□□□ 0.51
POLR2JP52435 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.22■□□□□ 0.51
POLR2JP52435 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.22■□□□□ 0.51
POLR2JP52435 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR2JP52435 AC120498.8-201ENST00000614275 531 ntBASIC18.22■□□□□ 0.51
POLR2JP52435 AL121829.2-201ENST00000620908 328 ntBASIC18.22■□□□□ 0.51
POLR2JP52435 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2JP52435 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2JP52435 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2JP52435 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2JP52435 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
POLR2JP52435 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2JP52435 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR2JP52435 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2JP52435 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2JP52435 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.22■□□□□ 0.51
POLR2JP52435 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
POLR2JP52435 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
POLR2JP52435 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2JP52435 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
POLR2JP52435 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR2JP52435 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2JP52435 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
POLR2JP52435 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2JP52435 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2JP52435 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2JP52435 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR2JP52435 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2JP52435 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
POLR2JP52435 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.21■□□□□ 0.51
POLR2JP52435 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.21■□□□□ 0.51
POLR2JP52435 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.21■□□□□ 0.51
POLR2JP52435 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
POLR2JP52435 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
POLR2JP52435 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR2JP52435 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.21■□□□□ 0.51
POLR2JP52435 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.21■□□□□ 0.51
POLR2JP52435 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.21■□□□□ 0.51
POLR2JP52435 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.21■□□□□ 0.51
POLR2JP52435 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR2JP52435 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2JP52435 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2JP52435 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
POLR2JP52435 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2JP52435 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2JP52435 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR2JP52435 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
POLR2JP52435 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2JP52435 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.21■□□□□ 0.51
POLR2JP52435 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
POLR2JP52435 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
POLR2JP52435 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.21■□□□□ 0.51
POLR2JP52435 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.2■□□□□ 0.5
POLR2JP52435 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.2■□□□□ 0.5
POLR2JP52435 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
POLR2JP52435 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.2■□□□□ 0.5
POLR2JP52435 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
POLR2JP52435 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.2■□□□□ 0.5
POLR2JP52435 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.2■□□□□ 0.5
POLR2JP52435 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
POLR2JP52435 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.2■□□□□ 0.5
POLR2JP52435 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
POLR2JP52435 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
POLR2JP52435 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
POLR2JP52435 SLC29A4P1-201ENST00000398760 971 ntBASIC18.2■□□□□ 0.5
POLR2JP52435 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.2■□□□□ 0.5
POLR2JP52435 AC097658.1-201ENST00000475555 843 ntBASIC18.2■□□□□ 0.5
POLR2JP52435 PNMA6B-201ENST00000538162 1200 ntBASIC18.2■□□□□ 0.5
POLR2JP52435 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.2■□□□□ 0.5
POLR2JP52435 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.2■□□□□ 0.5
POLR2JP52435 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.2■□□□□ 0.5
POLR2JP52435 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.2■□□□□ 0.5
POLR2JP52435 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.2■□□□□ 0.5
POLR2JP52435 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
POLR2JP52435 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
POLR2JP52435 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
POLR2JP52435 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
POLR2JP52435 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
POLR2JP52435 AC005332.8-201ENST00000622750 2735 ntBASIC18.19■□□□□ 0.5
POLR2JP52435 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms