Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 SOX15-203ENST00000570788 1093 ntBASIC17.45■□□□□ 0.38
SLC9A3P48764 AC008687.6-201ENST00000596318 630 ntBASIC17.45■□□□□ 0.38
SLC9A3P48764 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC9A3P48764 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC9A3P48764 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC9A3P48764 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC9A3P48764 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC9A3P48764 AL390961.4-201ENST00000623958 2535 ntBASIC17.45■□□□□ 0.38
SLC9A3P48764 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SLC9A3P48764 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC9A3P48764 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SLC9A3P48764 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC9A3P48764 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SLC9A3P48764 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SLC9A3P48764 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 AC069152.1-201ENST00000438030 544 ntBASIC17.44■□□□□ 0.38
SLC9A3P48764 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC9A3P48764 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC9A3P48764 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC9A3P48764 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SLC9A3P48764 AL109923.1-201ENST00000618799 583 ntBASIC17.44■□□□□ 0.38
SLC9A3P48764 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SLC9A3P48764 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SLC9A3P48764 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SLC9A3P48764 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC9A3P48764 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC9A3P48764 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC9A3P48764 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC9A3P48764 SDHAP1-207ENST00000440850 2000 ntBASIC17.43■□□□□ 0.38
SLC9A3P48764 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SLC9A3P48764 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLC9A3P48764 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SLC9A3P48764 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC9A3P48764 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
SLC9A3P48764 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC9A3P48764 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC9A3P48764 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC9A3P48764 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC9A3P48764 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC9A3P48764 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC9A3P48764 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC9A3P48764 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SLC9A3P48764 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SLC9A3P48764 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC9A3P48764 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLC9A3P48764 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SLC9A3P48764 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC9A3P48764 AC009113.1-201ENST00000570267 2443 ntBASIC17.42■□□□□ 0.38
SLC9A3P48764 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC9A3P48764 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC9A3P48764 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC9A3P48764 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLC9A3P48764 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SLC9A3P48764 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC9A3P48764 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLC9A3P48764 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC9A3P48764 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC9A3P48764 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC9A3P48764 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC9A3P48764 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC9A3P48764 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC9A3P48764 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC9A3P48764 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC9A3P48764 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC9A3P48764 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC9A3P48764 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLC9A3P48764 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC9A3P48764 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms