Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CBX5P45973 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.38■□□□□ 0.21
CBX5P45973 CYP2T3P-201ENST00000601990 817 ntBASIC16.38■□□□□ 0.21
CBX5P45973 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 ZNF815P-204ENST00000434898 1737 ntBASIC16.38■□□□□ 0.21
CBX5P45973 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CBX5P45973 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CBX5P45973 AL031598.1-201ENST00000561511 1773 ntBASIC16.38■□□□□ 0.21
CBX5P45973 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CBX5P45973 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CBX5P45973 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.38■□□□□ 0.21
CBX5P45973 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX5P45973 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBX5P45973 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CBX5P45973 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CBX5P45973 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.38■□□□□ 0.21
CBX5P45973 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX5P45973 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX5P45973 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CBX5P45973 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX5P45973 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 C2orf69P4-201ENST00000565394 541 ntBASIC16.37■□□□□ 0.21
CBX5P45973 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.37■□□□□ 0.21
CBX5P45973 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.37■□□□□ 0.21
CBX5P45973 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
CBX5P45973 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX5P45973 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CBX5P45973 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.37■□□□□ 0.21
CBX5P45973 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CBX5P45973 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CBX5P45973 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CBX5P45973 AC135050.7-201ENST00000624508 2218 ntBASIC16.37■□□□□ 0.21
CBX5P45973 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CBX5P45973 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
CBX5P45973 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CBX5P45973 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.36■□□□□ 0.21
CBX5P45973 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX5P45973 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.36■□□□□ 0.21
CBX5P45973 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.36■□□□□ 0.21
CBX5P45973 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX5P45973 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 AL390961.4-201ENST00000623958 2535 ntBASIC16.36■□□□□ 0.21
CBX5P45973 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX5P45973 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CBX5P45973 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 AL589743.5-201ENST00000616611 1050 ntBASIC16.36■□□□□ 0.21
CBX5P45973 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CBX5P45973 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX5P45973 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX5P45973 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX5P45973 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CBX5P45973 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX5P45973 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX5P45973 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX5P45973 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CBX5P45973 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CBX5P45973 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX5P45973 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CBX5P45973 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX5P45973 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX5P45973 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX5P45973 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.35■□□□□ 0.21
CBX5P45973 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX5P45973 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX5P45973 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CBX5P45973 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX5P45973 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms