Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP13P45452 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.8■□□□□ 0.76
MMP13P45452 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP13P45452 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MMP13P45452 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MMP13P45452 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.79■□□□□ 0.76
MMP13P45452 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.79■□□□□ 0.76
MMP13P45452 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
MMP13P45452 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP13P45452 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.79■□□□□ 0.76
MMP13P45452 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP13P45452 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MMP13P45452 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP13P45452 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MMP13P45452 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
MMP13P45452 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP13P45452 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP13P45452 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.79■□□□□ 0.76
MMP13P45452 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
MMP13P45452 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.79■□□□□ 0.76
MMP13P45452 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.79■□□□□ 0.76
MMP13P45452 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.79■□□□□ 0.76
MMP13P45452 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.79■□□□□ 0.76
MMP13P45452 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.79■□□□□ 0.76
MMP13P45452 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
MMP13P45452 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.79■□□□□ 0.76
MMP13P45452 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MMP13P45452 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP13P45452 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP13P45452 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.79■□□□□ 0.76
MMP13P45452 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.79■□□□□ 0.76
MMP13P45452 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
MMP13P45452 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MMP13P45452 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.78■□□□□ 0.76
MMP13P45452 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP13P45452 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MMP13P45452 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP13P45452 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
MMP13P45452 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MMP13P45452 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.78■□□□□ 0.76
MMP13P45452 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP13P45452 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MMP13P45452 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.78■□□□□ 0.76
MMP13P45452 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP13P45452 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MMP13P45452 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.78■□□□□ 0.76
MMP13P45452 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.78■□□□□ 0.76
MMP13P45452 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.78■□□□□ 0.76
MMP13P45452 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.78■□□□□ 0.76
MMP13P45452 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.78■□□□□ 0.76
MMP13P45452 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.78■□□□□ 0.76
MMP13P45452 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.78■□□□□ 0.76
MMP13P45452 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
MMP13P45452 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP13P45452 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP13P45452 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.78■□□□□ 0.76
MMP13P45452 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
MMP13P45452 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.78■□□□□ 0.76
MMP13P45452 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.78■□□□□ 0.76
MMP13P45452 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MMP13P45452 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP13P45452 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MMP13P45452 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP13P45452 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.77■□□□□ 0.76
MMP13P45452 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP13P45452 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP13P45452 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MMP13P45452 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.77■□□□□ 0.76
MMP13P45452 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP13P45452 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP13P45452 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MMP13P45452 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MMP13P45452 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP13P45452 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP13P45452 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP13P45452 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.77■□□□□ 0.76
MMP13P45452 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
MMP13P45452 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.77■□□□□ 0.76
MMP13P45452 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.77■□□□□ 0.76
MMP13P45452 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MMP13P45452 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
MMP13P45452 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
MMP13P45452 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
MMP13P45452 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
MMP13P45452 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
MMP13P45452 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MMP13P45452 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
MMP13P45452 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MMP13P45452 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP13P45452 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP13P45452 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MMP13P45452 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
MMP13P45452 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP13P45452 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MMP13P45452 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.76■□□□□ 0.75
MMP13P45452 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.76■□□□□ 0.75
MMP13P45452 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
MMP13P45452 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MMP13P45452 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.76■□□□□ 0.75
MMP13P45452 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms