Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RPL13AP40429 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RPL13AP40429 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RPL13AP40429 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.14□□□□□ -0.31
RPL13AP40429 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RPL13AP40429 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.14□□□□□ -0.31
RPL13AP40429 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RPL13AP40429 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RPL13AP40429 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RPL13AP40429 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RPL13AP40429 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.14□□□□□ -0.31
RPL13AP40429 AC055733.4-201ENST00000638462 1354 ntBASIC13.14□□□□□ -0.31
RPL13AP40429 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RPL13AP40429 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RPL13AP40429 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RPL13AP40429 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RPL13AP40429 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RPL13AP40429 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
RPL13AP40429 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RPL13AP40429 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RPL13AP40429 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC13.13□□□□□ -0.31
RPL13AP40429 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL13AP40429 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
RPL13AP40429 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
RPL13AP40429 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RPL13AP40429 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.13□□□□□ -0.31
RPL13AP40429 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL13AP40429 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL13AP40429 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL13AP40429 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RPL13AP40429 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
RPL13AP40429 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.13□□□□□ -0.31
RPL13AP40429 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL13AP40429 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RPL13AP40429 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RPL13AP40429 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
RPL13AP40429 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.13□□□□□ -0.31
RPL13AP40429 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL13AP40429 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL13AP40429 SNX3-202ENST00000349379 890 ntTSL 2 BASIC13.13□□□□□ -0.31
RPL13AP40429 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.13□□□□□ -0.31
RPL13AP40429 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
RPL13AP40429 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
RPL13AP40429 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.13□□□□□ -0.31
RPL13AP40429 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.13□□□□□ -0.31
RPL13AP40429 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RPL13AP40429 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
RPL13AP40429 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RPL13AP40429 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RPL13AP40429 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
RPL13AP40429 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.12□□□□□ -0.31
RPL13AP40429 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
RPL13AP40429 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.12□□□□□ -0.31
RPL13AP40429 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.12□□□□□ -0.31
RPL13AP40429 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC13.12□□□□□ -0.31
RPL13AP40429 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 IRS3P-201ENST00000223076 1006 ntBASIC13.12□□□□□ -0.31
RPL13AP40429 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.12□□□□□ -0.31
RPL13AP40429 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC13.12□□□□□ -0.31
RPL13AP40429 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.12□□□□□ -0.31
RPL13AP40429 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.12□□□□□ -0.31
RPL13AP40429 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RPL13AP40429 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.12□□□□□ -0.31
RPL13AP40429 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.12□□□□□ -0.31
RPL13AP40429 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
RPL13AP40429 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
RPL13AP40429 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RPL13AP40429 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.11□□□□□ -0.31
RPL13AP40429 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RPL13AP40429 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.11□□□□□ -0.31
RPL13AP40429 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.11□□□□□ -0.31
RPL13AP40429 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC13.11□□□□□ -0.31
RPL13AP40429 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RPL13AP40429 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RPL13AP40429 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RPL13AP40429 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms