Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SNCAP37840 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
SNCAP37840 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SNCAP37840 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 AC012313.1-201ENST00000593393 3059 ntBASIC15.66■□□□□ 0.1
SNCAP37840 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 AL355472.2-201ENST00000422958 438 ntBASIC15.66■□□□□ 0.1
SNCAP37840 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.66■□□□□ 0.1
SNCAP37840 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.66■□□□□ 0.1
SNCAP37840 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.66■□□□□ 0.1
SNCAP37840 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.66■□□□□ 0.1
SNCAP37840 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.66■□□□□ 0.1
SNCAP37840 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SNCAP37840 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.66■□□□□ 0.1
SNCAP37840 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNCAP37840 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.65■□□□□ 0.1
SNCAP37840 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SNCAP37840 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNCAP37840 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNCAP37840 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNCAP37840 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNCAP37840 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNCAP37840 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.65■□□□□ 0.1
SNCAP37840 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.65■□□□□ 0.1
SNCAP37840 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.65■□□□□ 0.1
SNCAP37840 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.65■□□□□ 0.1
SNCAP37840 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.65■□□□□ 0.1
SNCAP37840 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNCAP37840 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNCAP37840 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNCAP37840 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SNCAP37840 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNCAP37840 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SNCAP37840 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.65■□□□□ 0.1
SNCAP37840 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
SNCAP37840 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SNCAP37840 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SNCAP37840 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SNCAP37840 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 MKRN4P-201ENST00000444706 1521 ntBASIC15.64■□□□□ 0.09
SNCAP37840 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.64■□□□□ 0.09
SNCAP37840 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
SNCAP37840 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.64■□□□□ 0.09
SNCAP37840 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 AC006015.1-201ENST00000429970 570 ntBASIC15.64■□□□□ 0.09
SNCAP37840 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.64■□□□□ 0.09
SNCAP37840 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.64■□□□□ 0.09
SNCAP37840 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.64■□□□□ 0.09
SNCAP37840 AC010980.2-201ENST00000587099 1412 ntBASIC15.64■□□□□ 0.09
SNCAP37840 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.64■□□□□ 0.09
SNCAP37840 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.64■□□□□ 0.09
SNCAP37840 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.64■□□□□ 0.09
SNCAP37840 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SNCAP37840 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.64■□□□□ 0.09
SNCAP37840 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.64■□□□□ 0.09
SNCAP37840 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.64■□□□□ 0.09
SNCAP37840 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SNCAP37840 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
SNCAP37840 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SNCAP37840 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SNCAP37840 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SNCAP37840 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SNCAP37840 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNCAP37840 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
SNCAP37840 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNCAP37840 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNCAP37840 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNCAP37840 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.63■□□□□ 0.09
SNCAP37840 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNCAP37840 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SNCAP37840 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms