Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 MIR6084-201ENST00000622012 110 ntBASIC17.07■□□□□ 0.32
SOX6P35712 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SOX6P35712 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.07■□□□□ 0.32
SOX6P35712 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX6P35712 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.07■□□□□ 0.32
SOX6P35712 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SOX6P35712 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SOX6P35712 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SOX6P35712 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX6P35712 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.07■□□□□ 0.32
SOX6P35712 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SOX6P35712 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.07■□□□□ 0.32
SOX6P35712 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SOX6P35712 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX6P35712 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX6P35712 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SOX6P35712 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX6P35712 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SOX6P35712 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX6P35712 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SOX6P35712 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.06■□□□□ 0.32
SOX6P35712 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX6P35712 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX6P35712 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SOX6P35712 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.06■□□□□ 0.32
SOX6P35712 AC027612.3-201ENST00000413684 1047 ntBASIC17.06■□□□□ 0.32
SOX6P35712 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.06■□□□□ 0.32
SOX6P35712 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SOX6P35712 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX6P35712 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX6P35712 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX6P35712 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SOX6P35712 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.06■□□□□ 0.32
SOX6P35712 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
SOX6P35712 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.06■□□□□ 0.32
SOX6P35712 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SOX6P35712 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.06■□□□□ 0.32
SOX6P35712 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.06■□□□□ 0.32
SOX6P35712 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SOX6P35712 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.05■□□□□ 0.32
SOX6P35712 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SOX6P35712 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.05■□□□□ 0.32
SOX6P35712 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SOX6P35712 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SOX6P35712 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 CDV3P1-201ENST00000471403 739 ntBASIC17.05■□□□□ 0.32
SOX6P35712 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.05■□□□□ 0.32
SOX6P35712 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.05■□□□□ 0.32
SOX6P35712 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.05■□□□□ 0.32
SOX6P35712 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SOX6P35712 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.05■□□□□ 0.32
SOX6P35712 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SOX6P35712 AC087633.2-202ENST00000565166 1439 ntBASIC17.04■□□□□ 0.32
SOX6P35712 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX6P35712 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX6P35712 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX6P35712 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.04■□□□□ 0.32
SOX6P35712 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SOX6P35712 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX6P35712 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX6P35712 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX6P35712 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SOX6P35712 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.04■□□□□ 0.32
SOX6P35712 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.04■□□□□ 0.32
SOX6P35712 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SOX6P35712 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX6P35712 AC008764.6-201ENST00000595909 2069 ntBASIC17.04■□□□□ 0.32
SOX6P35712 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX6P35712 SIRPAP1-201ENST00000448467 1770 ntBASIC17.04■□□□□ 0.32
SOX6P35712 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SOX6P35712 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SOX6P35712 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
SOX6P35712 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX6P35712 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.04■□□□□ 0.32
SOX6P35712 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.04■□□□□ 0.32
SOX6P35712 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.04■□□□□ 0.32
SOX6P35712 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SOX6P35712 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SOX6P35712 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.03■□□□□ 0.32
SOX6P35712 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
SOX6P35712 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SOX6P35712 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SOX6P35712 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SOX6P35712 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms