Protein–RNA interactions for Protein: P35609

ACTN2, Alpha-actinin-2, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN2P35609 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.28■□□□□ 0.84
ACTN2P35609 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN2P35609 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN2P35609 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN2P35609 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN2P35609 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN2P35609 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN2P35609 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN2P35609 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN2P35609 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.27■□□□□ 0.84
ACTN2P35609 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN2P35609 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.27■□□□□ 0.84
ACTN2P35609 AL158047.1-201ENST00000445918 881 ntBASIC20.27■□□□□ 0.84
ACTN2P35609 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.27■□□□□ 0.84
ACTN2P35609 RPS2P4-201ENST00000476944 856 ntBASIC20.27■□□□□ 0.84
ACTN2P35609 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.27■□□□□ 0.84
ACTN2P35609 AC142381.4-202ENST00000563973 229 ntBASIC20.27■□□□□ 0.84
ACTN2P35609 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ACTN2P35609 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN2P35609 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
ACTN2P35609 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ACTN2P35609 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN2P35609 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ACTN2P35609 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.27■□□□□ 0.84
ACTN2P35609 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ACTN2P35609 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
ACTN2P35609 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ACTN2P35609 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
ACTN2P35609 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.27■□□□□ 0.83
ACTN2P35609 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.27■□□□□ 0.83
ACTN2P35609 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ACTN2P35609 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
ACTN2P35609 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.27■□□□□ 0.83
ACTN2P35609 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ACTN2P35609 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN2P35609 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ACTN2P35609 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN2P35609 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN2P35609 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.26■□□□□ 0.83
ACTN2P35609 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.26■□□□□ 0.83
ACTN2P35609 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN2P35609 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN2P35609 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN2P35609 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.26■□□□□ 0.83
ACTN2P35609 BX276092.2-201ENST00000417668 665 ntBASIC20.26■□□□□ 0.83
ACTN2P35609 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.26■□□□□ 0.83
ACTN2P35609 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.26■□□□□ 0.83
ACTN2P35609 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ACTN2P35609 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN2P35609 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.26■□□□□ 0.83
ACTN2P35609 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.26■□□□□ 0.83
ACTN2P35609 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ACTN2P35609 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN2P35609 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.26■□□□□ 0.83
ACTN2P35609 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN2P35609 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN2P35609 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACTN2P35609 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.26■□□□□ 0.83
ACTN2P35609 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.25■□□□□ 0.83
ACTN2P35609 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN2P35609 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ACTN2P35609 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN2P35609 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN2P35609 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ACTN2P35609 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN2P35609 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.25■□□□□ 0.83
ACTN2P35609 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ACTN2P35609 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.25■□□□□ 0.83
ACTN2P35609 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.25■□□□□ 0.83
ACTN2P35609 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ACTN2P35609 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.25■□□□□ 0.83
ACTN2P35609 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN2P35609 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN2P35609 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
ACTN2P35609 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN2P35609 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN2P35609 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN2P35609 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACTN2P35609 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.25■□□□□ 0.83
ACTN2P35609 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.25■□□□□ 0.83
ACTN2P35609 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.25■□□□□ 0.83
ACTN2P35609 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN2P35609 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
ACTN2P35609 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN2P35609 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN2P35609 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN2P35609 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN2P35609 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.24■□□□□ 0.83
ACTN2P35609 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.24■□□□□ 0.83
ACTN2P35609 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ACTN2P35609 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN2P35609 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.24■□□□□ 0.83
ACTN2P35609 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.24■□□□□ 0.83
ACTN2P35609 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.24■□□□□ 0.83
ACTN2P35609 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN2P35609 AC006058.3-201ENST00000606217 1069 ntBASIC20.24■□□□□ 0.83
ACTN2P35609 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ACTN2P35609 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN2P35609 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACTN2P35609 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms