Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.83■□□□□ 0.93
KRT9P35527 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.83■□□□□ 0.93
KRT9P35527 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.83■□□□□ 0.93
KRT9P35527 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.83■□□□□ 0.93
KRT9P35527 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
KRT9P35527 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT9P35527 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT9P35527 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
KRT9P35527 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
KRT9P35527 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT9P35527 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT9P35527 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT9P35527 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT9P35527 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
KRT9P35527 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT9P35527 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT9P35527 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
KRT9P35527 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT9P35527 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT9P35527 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT9P35527 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.82■□□□□ 0.92
KRT9P35527 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT9P35527 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT9P35527 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.82■□□□□ 0.92
KRT9P35527 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT9P35527 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.82■□□□□ 0.92
KRT9P35527 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT9P35527 AC026366.1-201ENST00000488803 879 ntBASIC20.82■□□□□ 0.92
KRT9P35527 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.82■□□□□ 0.92
KRT9P35527 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT9P35527 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.82■□□□□ 0.92
KRT9P35527 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT9P35527 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.82■□□□□ 0.92
KRT9P35527 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT9P35527 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT9P35527 AL390961.4-201ENST00000623958 2535 ntBASIC20.82■□□□□ 0.92
KRT9P35527 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT9P35527 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT9P35527 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
KRT9P35527 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
KRT9P35527 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
KRT9P35527 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.81■□□□□ 0.92
KRT9P35527 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
KRT9P35527 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.81■□□□□ 0.92
KRT9P35527 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
KRT9P35527 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
KRT9P35527 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.81■□□□□ 0.92
KRT9P35527 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
KRT9P35527 KRT17P3-201ENST00000420566 1262 ntBASIC20.81■□□□□ 0.92
KRT9P35527 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.81■□□□□ 0.92
KRT9P35527 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT9P35527 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.81■□□□□ 0.92
KRT9P35527 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT9P35527 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
KRT9P35527 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT9P35527 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.81■□□□□ 0.92
KRT9P35527 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
KRT9P35527 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
KRT9P35527 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
KRT9P35527 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.8■□□□□ 0.92
KRT9P35527 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.8■□□□□ 0.92
KRT9P35527 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT9P35527 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 FEM1AP3-201ENST00000403722 1741 ntBASIC20.8■□□□□ 0.92
KRT9P35527 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
KRT9P35527 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT9P35527 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT9P35527 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
KRT9P35527 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.79■□□□□ 0.92
KRT9P35527 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT9P35527 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms