Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD3P28288 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD3P28288 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD3P28288 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
ABCD3P28288 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ABCD3P28288 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ABCD3P28288 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD3P28288 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD3P28288 FEM1AP3-201ENST00000403722 1741 ntBASIC17.55■□□□□ 0.4
ABCD3P28288 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD3P28288 KRT8P9-201ENST00000558927 1449 ntBASIC17.55■□□□□ 0.4
ABCD3P28288 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD3P28288 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.55■□□□□ 0.4
ABCD3P28288 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD3P28288 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ABCD3P28288 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD3P28288 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD3P28288 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.54■□□□□ 0.4
ABCD3P28288 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD3P28288 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ABCD3P28288 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.54■□□□□ 0.4
ABCD3P28288 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.54■□□□□ 0.4
ABCD3P28288 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD3P28288 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.54■□□□□ 0.4
ABCD3P28288 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.54■□□□□ 0.4
ABCD3P28288 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD3P28288 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD3P28288 FP475955.4-201ENST00000623131 1990 ntBASIC17.54■□□□□ 0.4
ABCD3P28288 AC087499.1-201ENST00000418141 1075 ntBASIC17.54■□□□□ 0.4
ABCD3P28288 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.54■□□□□ 0.4
ABCD3P28288 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.54■□□□□ 0.4
ABCD3P28288 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.54■□□□□ 0.4
ABCD3P28288 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.54■□□□□ 0.4
ABCD3P28288 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD3P28288 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.54■□□□□ 0.4
ABCD3P28288 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ABCD3P28288 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD3P28288 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD3P28288 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.54■□□□□ 0.4
ABCD3P28288 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.54■□□□□ 0.4
ABCD3P28288 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.54■□□□□ 0.4
ABCD3P28288 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.54■□□□□ 0.4
ABCD3P28288 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ABCD3P28288 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
ABCD3P28288 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD3P28288 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD3P28288 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.53■□□□□ 0.4
ABCD3P28288 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD3P28288 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.53■□□□□ 0.4
ABCD3P28288 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.53■□□□□ 0.4
ABCD3P28288 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.53■□□□□ 0.4
ABCD3P28288 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.53■□□□□ 0.4
ABCD3P28288 CYP2D8P-201ENST00000433633 1490 ntBASIC17.53■□□□□ 0.4
ABCD3P28288 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ABCD3P28288 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD3P28288 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.53■□□□□ 0.4
ABCD3P28288 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.53■□□□□ 0.4
ABCD3P28288 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.53■□□□□ 0.4
ABCD3P28288 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD3P28288 C2orf69P3-201ENST00000565542 1120 ntBASIC17.53■□□□□ 0.4
ABCD3P28288 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.53■□□□□ 0.4
ABCD3P28288 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
ABCD3P28288 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD3P28288 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.53■□□□□ 0.4
ABCD3P28288 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.53■□□□□ 0.4
ABCD3P28288 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.53■□□□□ 0.4
ABCD3P28288 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.53■□□□□ 0.4
ABCD3P28288 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD3P28288 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD3P28288 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD3P28288 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ABCD3P28288 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ABCD3P28288 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ABCD3P28288 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ABCD3P28288 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ABCD3P28288 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.52■□□□□ 0.4
ABCD3P28288 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.52■□□□□ 0.4
ABCD3P28288 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
ABCD3P28288 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ABCD3P28288 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ABCD3P28288 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ABCD3P28288 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ABCD3P28288 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.52■□□□□ 0.4
ABCD3P28288 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.52■□□□□ 0.4
ABCD3P28288 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ABCD3P28288 NAPSB-206ENST00000562112 1266 ntBASIC17.52■□□□□ 0.4
ABCD3P28288 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.52■□□□□ 0.4
ABCD3P28288 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
ABCD3P28288 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ABCD3P28288 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ABCD3P28288 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ABCD3P28288 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ABCD3P28288 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
ABCD3P28288 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ABCD3P28288 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ABCD3P28288 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ABCD3P28288 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.52■□□□□ 0.39
ABCD3P28288 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ABCD3P28288 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ABCD3P28288 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms