Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP8P22894 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MMP8P22894 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.04■□□□□ 0.8
MMP8P22894 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.04■□□□□ 0.8
MMP8P22894 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.04■□□□□ 0.8
MMP8P22894 AC113410.3-201ENST00000623366 203 ntBASIC20.04■□□□□ 0.8
MMP8P22894 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.04■□□□□ 0.8
MMP8P22894 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.04■□□□□ 0.8
MMP8P22894 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.04■□□□□ 0.8
MMP8P22894 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MMP8P22894 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.04■□□□□ 0.8
MMP8P22894 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP8P22894 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MMP8P22894 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
MMP8P22894 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
MMP8P22894 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP8P22894 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
MMP8P22894 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP8P22894 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
MMP8P22894 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP8P22894 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
MMP8P22894 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP8P22894 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP8P22894 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MMP8P22894 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP8P22894 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.03■□□□□ 0.8
MMP8P22894 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MMP8P22894 AC116562.2-201ENST00000507042 360 ntBASIC20.03■□□□□ 0.8
MMP8P22894 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.03■□□□□ 0.8
MMP8P22894 CKBP1-201ENST00000565489 1086 ntBASIC20.03■□□□□ 0.8
MMP8P22894 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.03■□□□□ 0.8
MMP8P22894 AL049637.2-201ENST00000641778 930 ntBASIC20.03■□□□□ 0.8
MMP8P22894 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP8P22894 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MMP8P22894 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
MMP8P22894 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MMP8P22894 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
MMP8P22894 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MMP8P22894 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.03■□□□□ 0.8
MMP8P22894 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP8P22894 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
MMP8P22894 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MMP8P22894 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
MMP8P22894 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MMP8P22894 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MMP8P22894 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.02■□□□□ 0.8
MMP8P22894 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MMP8P22894 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
MMP8P22894 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
MMP8P22894 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MMP8P22894 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MMP8P22894 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
MMP8P22894 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
MMP8P22894 FAM207BP-201ENST00000447172 505 ntBASIC20.02■□□□□ 0.8
MMP8P22894 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
MMP8P22894 NUDT16P1-203ENST00000513809 620 ntBASIC20.02■□□□□ 0.8
MMP8P22894 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.02■□□□□ 0.8
MMP8P22894 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
MMP8P22894 Z99916.2-201ENST00000604037 246 ntBASIC20.02■□□□□ 0.8
MMP8P22894 AP000692.2-201ENST00000608391 879 ntBASIC20.02■□□□□ 0.8
MMP8P22894 AP001412.1-201ENST00000608405 714 ntBASIC20.02■□□□□ 0.8
MMP8P22894 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.02■□□□□ 0.8
MMP8P22894 AL512353.2-201ENST00000448759 1962 ntBASIC20.02■□□□□ 0.8
MMP8P22894 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MMP8P22894 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
MMP8P22894 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.02■□□□□ 0.8
MMP8P22894 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
MMP8P22894 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MMP8P22894 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
MMP8P22894 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MMP8P22894 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
MMP8P22894 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
MMP8P22894 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.02■□□□□ 0.79
MMP8P22894 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP8P22894 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP8P22894 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP8P22894 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP8P22894 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP8P22894 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP8P22894 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP8P22894 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.01■□□□□ 0.79
MMP8P22894 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
MMP8P22894 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
MMP8P22894 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.01■□□□□ 0.79
MMP8P22894 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.01■□□□□ 0.79
MMP8P22894 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.01■□□□□ 0.79
MMP8P22894 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.01■□□□□ 0.79
MMP8P22894 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.01■□□□□ 0.79
MMP8P22894 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP8P22894 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MMP8P22894 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP8P22894 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MMP8P22894 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20■□□□□ 0.79
MMP8P22894 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
MMP8P22894 Z98044.1-201ENST00000632503 1764 ntBASIC20■□□□□ 0.79
MMP8P22894 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MMP8P22894 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20■□□□□ 0.79
MMP8P22894 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20■□□□□ 0.79
MMP8P22894 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20■□□□□ 0.79
MMP8P22894 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms