Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
RFX1P22670 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFX1P22670 LINC01568-207ENST00000641790 1380 ntBASIC20.72■□□□□ 0.91
RFX1P22670 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFX1P22670 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX1P22670 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RFX1P22670 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX1P22670 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RFX1P22670 MIR1238-201ENST00000408483 83 ntBASIC20.72■□□□□ 0.91
RFX1P22670 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.72■□□□□ 0.91
RFX1P22670 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.72■□□□□ 0.91
RFX1P22670 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.72■□□□□ 0.91
RFX1P22670 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RFX1P22670 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX1P22670 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
RFX1P22670 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFX1P22670 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RFX1P22670 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX1P22670 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX1P22670 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX1P22670 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX1P22670 FP475955.4-201ENST00000623131 1990 ntBASIC20.72■□□□□ 0.91
RFX1P22670 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX1P22670 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RFX1P22670 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFX1P22670 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFX1P22670 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RFX1P22670 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.71■□□□□ 0.91
RFX1P22670 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.71■□□□□ 0.91
RFX1P22670 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RFX1P22670 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 AC113347.1-201ENST00000413321 391 ntBASIC20.71■□□□□ 0.91
RFX1P22670 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.71■□□□□ 0.91
RFX1P22670 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.71■□□□□ 0.91
RFX1P22670 AP002982.1-201ENST00000492365 877 ntBASIC20.71■□□□□ 0.91
RFX1P22670 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.71■□□□□ 0.91
RFX1P22670 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.71■□□□□ 0.91
RFX1P22670 AC087388.1-201ENST00000571370 1112 ntBASIC20.71■□□□□ 0.91
RFX1P22670 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.71■□□□□ 0.91
RFX1P22670 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.71■□□□□ 0.91
RFX1P22670 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
RFX1P22670 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.71■□□□□ 0.91
RFX1P22670 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX1P22670 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX1P22670 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RFX1P22670 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX1P22670 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX1P22670 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RFX1P22670 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFX1P22670 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.7■□□□□ 0.9
RFX1P22670 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.7■□□□□ 0.9
RFX1P22670 NAPSB-206ENST00000562112 1266 ntBASIC20.7■□□□□ 0.9
RFX1P22670 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.7■□□□□ 0.9
RFX1P22670 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.7■□□□□ 0.9
RFX1P22670 AP000525.1-201ENST00000608286 694 ntBASIC20.7■□□□□ 0.9
RFX1P22670 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.7■□□□□ 0.9
RFX1P22670 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFX1P22670 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFX1P22670 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX1P22670 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.7■□□□□ 0.9
RFX1P22670 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.7■□□□□ 0.9
RFX1P22670 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX1P22670 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX1P22670 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX1P22670 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX1P22670 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RFX1P22670 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.7■□□□□ 0.9
RFX1P22670 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX1P22670 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RFX1P22670 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RFX1P22670 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX1P22670 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX1P22670 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.69■□□□□ 0.9
RFX1P22670 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX1P22670 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX1P22670 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFX1P22670 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFX1P22670 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX1P22670 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFX1P22670 TSPY21P-201ENST00000433481 731 ntBASIC20.69■□□□□ 0.9
RFX1P22670 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFX1P22670 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.69■□□□□ 0.9
RFX1P22670 RBM17P1-201ENST00000453646 1190 ntBASIC20.69■□□□□ 0.9
RFX1P22670 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
RFX1P22670 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms