Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.83■□□□□ 0.28
MSR1P21757 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.82■□□□□ 0.28
MSR1P21757 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.82■□□□□ 0.28
MSR1P21757 KRT8P41-201ENST00000533985 1514 ntBASIC16.82■□□□□ 0.28
MSR1P21757 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.82■□□□□ 0.28
MSR1P21757 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
MSR1P21757 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MSR1P21757 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.82■□□□□ 0.28
MSR1P21757 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.82■□□□□ 0.28
MSR1P21757 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
MSR1P21757 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.82■□□□□ 0.28
MSR1P21757 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.82■□□□□ 0.28
MSR1P21757 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.82■□□□□ 0.28
MSR1P21757 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.82■□□□□ 0.28
MSR1P21757 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.82■□□□□ 0.28
MSR1P21757 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.82■□□□□ 0.28
MSR1P21757 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.82■□□□□ 0.28
MSR1P21757 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MSR1P21757 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
MSR1P21757 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
MSR1P21757 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.81■□□□□ 0.28
MSR1P21757 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.81■□□□□ 0.28
MSR1P21757 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
MSR1P21757 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MSR1P21757 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.81■□□□□ 0.28
MSR1P21757 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 PRORSD1P-201ENST00000295112 541 ntBASIC16.81■□□□□ 0.28
MSR1P21757 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 AC004980.1-204ENST00000429707 299 ntBASIC16.81■□□□□ 0.28
MSR1P21757 TSPY23P-201ENST00000440136 739 ntBASIC16.81■□□□□ 0.28
MSR1P21757 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MSR1P21757 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.81■□□□□ 0.28
MSR1P21757 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.81■□□□□ 0.28
MSR1P21757 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.81■□□□□ 0.28
MSR1P21757 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.81■□□□□ 0.28
MSR1P21757 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.81■□□□□ 0.28
MSR1P21757 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.81■□□□□ 0.28
MSR1P21757 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.81■□□□□ 0.28
MSR1P21757 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.81■□□□□ 0.28
MSR1P21757 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.81■□□□□ 0.28
MSR1P21757 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MSR1P21757 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MSR1P21757 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MSR1P21757 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MSR1P21757 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.8■□□□□ 0.28
MSR1P21757 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSR1P21757 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.8■□□□□ 0.28
MSR1P21757 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSR1P21757 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSR1P21757 KRT16P1-201ENST00000399124 1418 ntBASIC16.8■□□□□ 0.28
MSR1P21757 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSR1P21757 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSR1P21757 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSR1P21757 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.8■□□□□ 0.28
MSR1P21757 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.8■□□□□ 0.28
MSR1P21757 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.8■□□□□ 0.28
MSR1P21757 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSR1P21757 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MSR1P21757 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
MSR1P21757 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSR1P21757 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSR1P21757 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
MSR1P21757 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MSR1P21757 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms