Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM21P19474 PRORSD1P-201ENST00000295112 541 ntBASIC20.99■□□□□ 0.95
TRIM21P19474 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM21P19474 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM21P19474 KRASP1-201ENST00000407852 552 ntBASIC20.99■□□□□ 0.95
TRIM21P19474 YBX1P10-201ENST00000444752 975 ntBASIC20.99■□□□□ 0.95
TRIM21P19474 AC133681.1-201ENST00000465482 601 ntBASIC20.99■□□□□ 0.95
TRIM21P19474 RPPH1-201ENST00000516869 333 ntBASIC20.99■□□□□ 0.95
TRIM21P19474 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
TRIM21P19474 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.99■□□□□ 0.95
TRIM21P19474 AC233263.1-201ENST00000578059 224 ntBASIC20.99■□□□□ 0.95
TRIM21P19474 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM21P19474 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM21P19474 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM21P19474 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM21P19474 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM21P19474 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM21P19474 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM21P19474 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM21P19474 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM21P19474 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM21P19474 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM21P19474 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
TRIM21P19474 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TRIM21P19474 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
TRIM21P19474 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM21P19474 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM21P19474 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM21P19474 KRT8P8-201ENST00000434750 1448 ntBASIC20.98■□□□□ 0.95
TRIM21P19474 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM21P19474 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM21P19474 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM21P19474 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM21P19474 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM21P19474 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM21P19474 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM21P19474 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM21P19474 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.98■□□□□ 0.95
TRIM21P19474 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM21P19474 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM21P19474 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM21P19474 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.98■□□□□ 0.95
TRIM21P19474 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM21P19474 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM21P19474 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRIM21P19474 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRIM21P19474 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM21P19474 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM21P19474 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM21P19474 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM21P19474 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM21P19474 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM21P19474 AL158047.1-201ENST00000445918 881 ntBASIC20.97■□□□□ 0.95
TRIM21P19474 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM21P19474 UBE2SP1-201ENST00000450587 669 ntBASIC20.97■□□□□ 0.95
TRIM21P19474 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM21P19474 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM21P19474 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM21P19474 AP006294.2-201ENST00000641667 209 ntBASIC20.97■□□□□ 0.95
TRIM21P19474 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM21P19474 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM21P19474 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM21P19474 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM21P19474 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM21P19474 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM21P19474 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM21P19474 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM21P19474 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM21P19474 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM21P19474 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.96■□□□□ 0.95
TRIM21P19474 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM21P19474 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM21P19474 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM21P19474 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM21P19474 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM21P19474 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM21P19474 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM21P19474 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM21P19474 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM21P19474 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TRIM21P19474 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM21P19474 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM21P19474 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM21P19474 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM21P19474 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.96■□□□□ 0.95
TRIM21P19474 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
TRIM21P19474 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM21P19474 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM21P19474 AC124016.1-201ENST00000609552 612 ntBASIC20.96■□□□□ 0.95
TRIM21P19474 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TRIM21P19474 AL359736.2-201ENST00000621992 437 ntBASIC20.96■□□□□ 0.95
TRIM21P19474 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM21P19474 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.96■□□□□ 0.95
TRIM21P19474 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM21P19474 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM21P19474 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM21P19474 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM21P19474 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM21P19474 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM21P19474 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms