Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.81■□□□□ 0.76
H2AFXP16104 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.81■□□□□ 0.76
H2AFXP16104 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2AFXP16104 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2AFXP16104 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
H2AFXP16104 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
H2AFXP16104 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
H2AFXP16104 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
H2AFXP16104 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2AFXP16104 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2AFXP16104 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
H2AFXP16104 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.8■□□□□ 0.76
H2AFXP16104 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2AFXP16104 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.8■□□□□ 0.76
H2AFXP16104 KRT18P20-201ENST00000548986 1279 ntBASIC19.8■□□□□ 0.76
H2AFXP16104 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.8■□□□□ 0.76
H2AFXP16104 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.8■□□□□ 0.76
H2AFXP16104 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
H2AFXP16104 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.8■□□□□ 0.76
H2AFXP16104 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2AFXP16104 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
H2AFXP16104 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
H2AFXP16104 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
H2AFXP16104 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.8■□□□□ 0.76
H2AFXP16104 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
H2AFXP16104 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
H2AFXP16104 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
H2AFXP16104 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.8■□□□□ 0.76
H2AFXP16104 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H2AFXP16104 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H2AFXP16104 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H2AFXP16104 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
H2AFXP16104 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H2AFXP16104 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2AFXP16104 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.79■□□□□ 0.76
H2AFXP16104 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.79■□□□□ 0.76
H2AFXP16104 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.79■□□□□ 0.76
H2AFXP16104 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.79■□□□□ 0.76
H2AFXP16104 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.79■□□□□ 0.76
H2AFXP16104 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.79■□□□□ 0.76
H2AFXP16104 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H2AFXP16104 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2AFXP16104 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2AFXP16104 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H2AFXP16104 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2AFXP16104 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
H2AFXP16104 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.79■□□□□ 0.76
H2AFXP16104 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
H2AFXP16104 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
H2AFXP16104 AC011270.2-201ENST00000624293 2550 ntBASIC19.79■□□□□ 0.76
H2AFXP16104 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
H2AFXP16104 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2AFXP16104 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
H2AFXP16104 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
H2AFXP16104 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2AFXP16104 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
H2AFXP16104 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2AFXP16104 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
H2AFXP16104 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.78■□□□□ 0.76
H2AFXP16104 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2AFXP16104 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2AFXP16104 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
H2AFXP16104 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.78■□□□□ 0.76
H2AFXP16104 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.78■□□□□ 0.76
H2AFXP16104 SLC7A5P1-201ENST00000568957 537 ntBASIC19.78■□□□□ 0.76
H2AFXP16104 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.78■□□□□ 0.76
H2AFXP16104 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
H2AFXP16104 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2AFXP16104 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
H2AFXP16104 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
H2AFXP16104 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.78■□□□□ 0.76
H2AFXP16104 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.78■□□□□ 0.76
H2AFXP16104 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2AFXP16104 AC116351.2-201ENST00000606540 1585 ntBASIC19.78■□□□□ 0.76
H2AFXP16104 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
H2AFXP16104 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2AFXP16104 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2AFXP16104 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
H2AFXP16104 AC093677.2-201ENST00000600169 1863 ntBASIC19.77■□□□□ 0.76
H2AFXP16104 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.77■□□□□ 0.76
H2AFXP16104 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
H2AFXP16104 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.77■□□□□ 0.76
H2AFXP16104 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
H2AFXP16104 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
H2AFXP16104 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
H2AFXP16104 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
H2AFXP16104 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
H2AFXP16104 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.77■□□□□ 0.76
H2AFXP16104 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.77■□□□□ 0.76
H2AFXP16104 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.77■□□□□ 0.76
H2AFXP16104 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
H2AFXP16104 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.77■□□□□ 0.76
H2AFXP16104 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
H2AFXP16104 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
H2AFXP16104 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
H2AFXP16104 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
H2AFXP16104 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
H2AFXP16104 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
H2AFXP16104 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
H2AFXP16104 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms