Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SMIM17P0DL12 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM17P0DL12 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM17P0DL12 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 AC007322.4-201ENST00000509611 723 ntBASIC14.17□□□□□ -0.14
SMIM17P0DL12 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.17□□□□□ -0.14
SMIM17P0DL12 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SMIM17P0DL12 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.17□□□□□ -0.14
SMIM17P0DL12 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.17□□□□□ -0.14
SMIM17P0DL12 AC105020.6-201ENST00000621523 1217 ntBASIC14.17□□□□□ -0.14
SMIM17P0DL12 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SMIM17P0DL12 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
SMIM17P0DL12 PRORSD1P-202ENST00000563365 2154 ntBASIC14.17□□□□□ -0.14
SMIM17P0DL12 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.17□□□□□ -0.14
SMIM17P0DL12 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SMIM17P0DL12 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SMIM17P0DL12 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 AC018470.1-201ENST00000624790 3129 ntBASIC14.17□□□□□ -0.14
SMIM17P0DL12 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SMIM17P0DL12 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SMIM17P0DL12 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SMIM17P0DL12 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SMIM17P0DL12 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SMIM17P0DL12 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.16□□□□□ -0.14
SMIM17P0DL12 KRT18P68-201ENST00000392293 1000 ntBASIC14.16□□□□□ -0.14
SMIM17P0DL12 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM17P0DL12 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.16□□□□□ -0.14
SMIM17P0DL12 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SMIM17P0DL12 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM17P0DL12 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
SMIM17P0DL12 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM17P0DL12 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM17P0DL12 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.16□□□□□ -0.14
SMIM17P0DL12 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMIM17P0DL12 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM17P0DL12 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SMIM17P0DL12 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM17P0DL12 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM17P0DL12 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM17P0DL12 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM17P0DL12 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
SMIM17P0DL12 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM17P0DL12 AC104581.1-202ENST00000635932 2618 ntBASIC14.15□□□□□ -0.14
SMIM17P0DL12 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SMIM17P0DL12 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
SMIM17P0DL12 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SMIM17P0DL12 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
SMIM17P0DL12 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM17P0DL12 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM17P0DL12 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM17P0DL12 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMIM17P0DL12 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.15□□□□□ -0.14
SMIM17P0DL12 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.15□□□□□ -0.14
SMIM17P0DL12 AC016405.3-201ENST00000607710 860 ntBASIC14.15□□□□□ -0.14
SMIM17P0DL12 AC008694.1-202ENST00000636953 945 ntBASIC14.15□□□□□ -0.14
SMIM17P0DL12 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.15□□□□□ -0.14
SMIM17P0DL12 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.15□□□□□ -0.14
SMIM17P0DL12 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms