Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
FAM228BP0C875 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.32■□□□□ 0.84
FAM228BP0C875 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
FAM228BP0C875 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.32■□□□□ 0.84
FAM228BP0C875 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 AC233263.1-201ENST00000578059 224 ntBASIC20.32■□□□□ 0.84
FAM228BP0C875 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.32■□□□□ 0.84
FAM228BP0C875 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.32■□□□□ 0.84
FAM228BP0C875 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.32■□□□□ 0.84
FAM228BP0C875 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.32■□□□□ 0.84
FAM228BP0C875 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.32■□□□□ 0.84
FAM228BP0C875 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
FAM228BP0C875 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.32■□□□□ 0.84
FAM228BP0C875 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
FAM228BP0C875 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM228BP0C875 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FAM228BP0C875 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FAM228BP0C875 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.31■□□□□ 0.84
FAM228BP0C875 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
FAM228BP0C875 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
FAM228BP0C875 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FAM228BP0C875 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.31■□□□□ 0.84
FAM228BP0C875 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FAM228BP0C875 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM228BP0C875 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM228BP0C875 HLA-L-209ENST00000420110 1011 ntBASIC20.31■□□□□ 0.84
FAM228BP0C875 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.31■□□□□ 0.84
FAM228BP0C875 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.31■□□□□ 0.84
FAM228BP0C875 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.31■□□□□ 0.84
FAM228BP0C875 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FAM228BP0C875 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FAM228BP0C875 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.31■□□□□ 0.84
FAM228BP0C875 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FAM228BP0C875 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.31■□□□□ 0.84
FAM228BP0C875 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM228BP0C875 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.31■□□□□ 0.84
FAM228BP0C875 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.31■□□□□ 0.84
FAM228BP0C875 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
FAM228BP0C875 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FAM228BP0C875 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.31■□□□□ 0.84
FAM228BP0C875 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.31■□□□□ 0.84
FAM228BP0C875 KRT8P41-201ENST00000533985 1514 ntBASIC20.31■□□□□ 0.84
FAM228BP0C875 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.31■□□□□ 0.84
FAM228BP0C875 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM228BP0C875 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.31■□□□□ 0.84
FAM228BP0C875 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM228BP0C875 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 AL390961.4-201ENST00000623958 2535 ntBASIC20.3■□□□□ 0.84
FAM228BP0C875 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.3■□□□□ 0.84
FAM228BP0C875 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.3■□□□□ 0.84
FAM228BP0C875 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.3■□□□□ 0.84
FAM228BP0C875 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.3■□□□□ 0.84
FAM228BP0C875 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.3■□□□□ 0.84
FAM228BP0C875 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.3■□□□□ 0.84
FAM228BP0C875 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
FAM228BP0C875 AP003097.1-201ENST00000530657 1135 ntBASIC20.3■□□□□ 0.84
FAM228BP0C875 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.3■□□□□ 0.84
FAM228BP0C875 AC069544.1-201ENST00000609399 999 ntBASIC20.3■□□□□ 0.84
FAM228BP0C875 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.3■□□□□ 0.84
FAM228BP0C875 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM228BP0C875 BICD1-207ENST00000551848 1962 ntBASIC20.3■□□□□ 0.84
FAM228BP0C875 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
FAM228BP0C875 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.3■□□□□ 0.84
FAM228BP0C875 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FAM228BP0C875 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
FAM228BP0C875 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
FAM228BP0C875 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
FAM228BP0C875 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.29■□□□□ 0.84
FAM228BP0C875 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
FAM228BP0C875 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
FAM228BP0C875 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FAM228BP0C875 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM228BP0C875 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms