Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 AC100791.3-201ENST00000617619 330 ntBASIC17.38■□□□□ 0.37
HTR1AP08908 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR1AP08908 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HTR1AP08908 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HTR1AP08908 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HTR1AP08908 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HTR1AP08908 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HTR1AP08908 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR1AP08908 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.38■□□□□ 0.37
HTR1AP08908 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR1AP08908 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR1AP08908 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.38■□□□□ 0.37
HTR1AP08908 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR1AP08908 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR1AP08908 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HTR1AP08908 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HTR1AP08908 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HTR1AP08908 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HTR1AP08908 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
HTR1AP08908 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.37■□□□□ 0.37
HTR1AP08908 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.37■□□□□ 0.37
HTR1AP08908 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 AC073592.3-201ENST00000625118 1834 ntBASIC17.37■□□□□ 0.37
HTR1AP08908 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.37■□□□□ 0.37
HTR1AP08908 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 BCL2-203ENST00000589955 5011 ntBASIC17.37■□□□□ 0.37
HTR1AP08908 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HTR1AP08908 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTR1AP08908 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTR1AP08908 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTR1AP08908 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTR1AP08908 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTR1AP08908 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.36■□□□□ 0.37
HTR1AP08908 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.36■□□□□ 0.37
HTR1AP08908 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTR1AP08908 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTR1AP08908 KRT18P11-201ENST00000435214 1283 ntBASIC17.36■□□□□ 0.37
HTR1AP08908 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.36■□□□□ 0.37
HTR1AP08908 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.36■□□□□ 0.37
HTR1AP08908 MFSD11-216ENST00000590393 1141 ntBASIC17.36■□□□□ 0.37
HTR1AP08908 AC105020.6-201ENST00000621523 1217 ntBASIC17.36■□□□□ 0.37
HTR1AP08908 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTR1AP08908 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTR1AP08908 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTR1AP08908 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.36■□□□□ 0.37
HTR1AP08908 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.36■□□□□ 0.37
HTR1AP08908 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.36■□□□□ 0.37
HTR1AP08908 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTR1AP08908 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HTR1AP08908 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.36■□□□□ 0.37
HTR1AP08908 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HTR1AP08908 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTR1AP08908 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HTR1AP08908 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HTR1AP08908 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HTR1AP08908 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
HTR1AP08908 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.35■□□□□ 0.37
HTR1AP08908 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTR1AP08908 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HTR1AP08908 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
HTR1AP08908 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTR1AP08908 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTR1AP08908 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTR1AP08908 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.35■□□□□ 0.37
HTR1AP08908 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTR1AP08908 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTR1AP08908 RARRES2P4-201ENST00000514074 484 ntBASIC17.35■□□□□ 0.37
HTR1AP08908 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.35■□□□□ 0.37
HTR1AP08908 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HTR1AP08908 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTR1AP08908 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTR1AP08908 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTR1AP08908 AC018553.1-201ENST00000616682 1458 ntBASIC17.35■□□□□ 0.37
HTR1AP08908 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTR1AP08908 AL162741.1-201ENST00000565563 1558 ntBASIC17.35■□□□□ 0.37
HTR1AP08908 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HTR1AP08908 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HTR1AP08908 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HTR1AP08908 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.35■□□□□ 0.37
HTR1AP08908 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HTR1AP08908 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HTR1AP08908 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms