Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
THBS1P07996 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THBS1P07996 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.53■□□□□ 0.4
THBS1P07996 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
THBS1P07996 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.53■□□□□ 0.4
THBS1P07996 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.53■□□□□ 0.4
THBS1P07996 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
THBS1P07996 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
THBS1P07996 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.53■□□□□ 0.4
THBS1P07996 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.53■□□□□ 0.4
THBS1P07996 AC131212.4-201ENST00000623606 975 ntBASIC17.53■□□□□ 0.4
THBS1P07996 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THBS1P07996 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
THBS1P07996 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THBS1P07996 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
THBS1P07996 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.53■□□□□ 0.4
THBS1P07996 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
THBS1P07996 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
THBS1P07996 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.52■□□□□ 0.4
THBS1P07996 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
THBS1P07996 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
THBS1P07996 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
THBS1P07996 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
THBS1P07996 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.52■□□□□ 0.4
THBS1P07996 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
THBS1P07996 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.52■□□□□ 0.4
THBS1P07996 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.52■□□□□ 0.4
THBS1P07996 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
THBS1P07996 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.52■□□□□ 0.4
THBS1P07996 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
THBS1P07996 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
THBS1P07996 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
THBS1P07996 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
THBS1P07996 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
THBS1P07996 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
THBS1P07996 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
THBS1P07996 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
THBS1P07996 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
THBS1P07996 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.52■□□□□ 0.39
THBS1P07996 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.52■□□□□ 0.39
THBS1P07996 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
THBS1P07996 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
THBS1P07996 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
THBS1P07996 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
THBS1P07996 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.51■□□□□ 0.39
THBS1P07996 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.51■□□□□ 0.39
THBS1P07996 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
THBS1P07996 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
THBS1P07996 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 AL353807.1-201ENST00000427475 662 ntBASIC17.51■□□□□ 0.39
THBS1P07996 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.51■□□□□ 0.39
THBS1P07996 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.51■□□□□ 0.39
THBS1P07996 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
THBS1P07996 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.51■□□□□ 0.39
THBS1P07996 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.51■□□□□ 0.39
THBS1P07996 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.51■□□□□ 0.39
THBS1P07996 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.51■□□□□ 0.39
THBS1P07996 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
THBS1P07996 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
THBS1P07996 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.51■□□□□ 0.39
THBS1P07996 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
THBS1P07996 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
THBS1P07996 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
THBS1P07996 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
THBS1P07996 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
THBS1P07996 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
THBS1P07996 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.5■□□□□ 0.39
THBS1P07996 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
THBS1P07996 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
THBS1P07996 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
THBS1P07996 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
THBS1P07996 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.5■□□□□ 0.39
THBS1P07996 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
THBS1P07996 AL596275.1-201ENST00000423464 877 ntBASIC17.5■□□□□ 0.39
THBS1P07996 AC004980.1-204ENST00000429707 299 ntBASIC17.5■□□□□ 0.39
THBS1P07996 AL158047.1-201ENST00000445918 881 ntBASIC17.5■□□□□ 0.39
THBS1P07996 KSR1P1-201ENST00000446298 240 ntBASIC17.5■□□□□ 0.39
THBS1P07996 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.5■□□□□ 0.39
THBS1P07996 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.5■□□□□ 0.39
THBS1P07996 AP002982.1-201ENST00000492365 877 ntBASIC17.5■□□□□ 0.39
THBS1P07996 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.5■□□□□ 0.39
THBS1P07996 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms