Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.83■□□□□ 0.12
CTSDP07339 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CTSDP07339 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSDP07339 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CTSDP07339 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.83■□□□□ 0.12
CTSDP07339 AL162741.1-201ENST00000565563 1558 ntBASIC15.83■□□□□ 0.12
CTSDP07339 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CTSDP07339 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.83■□□□□ 0.12
CTSDP07339 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CTSDP07339 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CTSDP07339 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.82■□□□□ 0.12
CTSDP07339 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.82■□□□□ 0.12
CTSDP07339 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CTSDP07339 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.82■□□□□ 0.12
CTSDP07339 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CTSDP07339 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.82■□□□□ 0.12
CTSDP07339 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.82■□□□□ 0.12
CTSDP07339 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.82■□□□□ 0.12
CTSDP07339 AC137761.2-201ENST00000561729 223 ntBASIC15.82■□□□□ 0.12
CTSDP07339 AC145350.3-201ENST00000569033 163 ntBASIC15.82■□□□□ 0.12
CTSDP07339 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.82■□□□□ 0.12
CTSDP07339 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.82■□□□□ 0.12
CTSDP07339 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CTSDP07339 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.82■□□□□ 0.12
CTSDP07339 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.82■□□□□ 0.12
CTSDP07339 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSDP07339 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.81■□□□□ 0.12
CTSDP07339 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.81■□□□□ 0.12
CTSDP07339 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CTSDP07339 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.81■□□□□ 0.12
CTSDP07339 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CTSDP07339 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.81■□□□□ 0.12
CTSDP07339 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.81■□□□□ 0.12
CTSDP07339 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.81■□□□□ 0.12
CTSDP07339 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.81■□□□□ 0.12
CTSDP07339 AL390719.1-204ENST00000412397 1219 ntBASIC15.81■□□□□ 0.12
CTSDP07339 AC073210.2-201ENST00000430369 194 ntBASIC15.81■□□□□ 0.12
CTSDP07339 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CTSDP07339 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.81■□□□□ 0.12
CTSDP07339 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.81■□□□□ 0.12
CTSDP07339 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.81■□□□□ 0.12
CTSDP07339 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CTSDP07339 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CTSDP07339 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTSDP07339 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CTSDP07339 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CTSDP07339 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.8■□□□□ 0.12
CTSDP07339 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.8■□□□□ 0.12
CTSDP07339 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.8■□□□□ 0.12
CTSDP07339 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CTSDP07339 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CTSDP07339 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CTSDP07339 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
CTSDP07339 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CTSDP07339 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.8■□□□□ 0.12
CTSDP07339 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms