Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.42■□□□□ 0.86
TUBB4AP04350 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TUBB4AP04350 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TUBB4AP04350 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TUBB4AP04350 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.41■□□□□ 0.86
TUBB4AP04350 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TUBB4AP04350 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.41■□□□□ 0.86
TUBB4AP04350 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.41■□□□□ 0.86
TUBB4AP04350 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.41■□□□□ 0.86
TUBB4AP04350 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TUBB4AP04350 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBB4AP04350 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TUBB4AP04350 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBB4AP04350 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBB4AP04350 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.4■□□□□ 0.86
TUBB4AP04350 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.4■□□□□ 0.86
TUBB4AP04350 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TUBB4AP04350 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBB4AP04350 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBB4AP04350 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.4■□□□□ 0.86
TUBB4AP04350 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBB4AP04350 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBB4AP04350 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
TUBB4AP04350 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TUBB4AP04350 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBB4AP04350 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TUBB4AP04350 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.39■□□□□ 0.86
TUBB4AP04350 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TUBB4AP04350 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TUBB4AP04350 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.39■□□□□ 0.86
TUBB4AP04350 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TUBB4AP04350 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
TUBB4AP04350 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TUBB4AP04350 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.39■□□□□ 0.85
TUBB4AP04350 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TUBB4AP04350 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TUBB4AP04350 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TUBB4AP04350 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TUBB4AP04350 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.39■□□□□ 0.85
TUBB4AP04350 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.39■□□□□ 0.85
TUBB4AP04350 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.39■□□□□ 0.85
TUBB4AP04350 TERF1P2-201ENST00000583350 1212 ntBASIC20.39■□□□□ 0.85
TUBB4AP04350 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TUBB4AP04350 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
TUBB4AP04350 AC141586.5-201ENST00000624546 2050 ntBASIC20.39■□□□□ 0.85
TUBB4AP04350 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TUBB4AP04350 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.39■□□□□ 0.85
TUBB4AP04350 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.39■□□□□ 0.85
TUBB4AP04350 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
TUBB4AP04350 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TUBB4AP04350 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TUBB4AP04350 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TUBB4AP04350 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.38■□□□□ 0.85
TUBB4AP04350 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.38■□□□□ 0.85
TUBB4AP04350 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBB4AP04350 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
TUBB4AP04350 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBB4AP04350 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBB4AP04350 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBB4AP04350 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBB4AP04350 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.38■□□□□ 0.85
TUBB4AP04350 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBB4AP04350 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
TUBB4AP04350 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TUBB4AP04350 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TUBB4AP04350 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TUBB4AP04350 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBB4AP04350 AC007322.4-201ENST00000509611 723 ntBASIC20.38■□□□□ 0.85
TUBB4AP04350 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.38■□□□□ 0.85
TUBB4AP04350 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.38■□□□□ 0.85
TUBB4AP04350 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.38■□□□□ 0.85
TUBB4AP04350 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.38■□□□□ 0.85
TUBB4AP04350 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TUBB4AP04350 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.38■□□□□ 0.85
TUBB4AP04350 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TUBB4AP04350 AC009053.2-201ENST00000563701 2365 ntBASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms