Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC11.89□□□□□ -0.51
APOBP04114 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC11.89□□□□□ -0.51
APOBP04114 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC11.89□□□□□ -0.51
APOBP04114 CFL1-212ENST00000531413 636 ntTSL 3 BASIC11.89□□□□□ -0.51
APOBP04114 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC11.89□□□□□ -0.51
APOBP04114 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOBP04114 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOBP04114 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOBP04114 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOBP04114 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOBP04114 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOBP04114 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
APOBP04114 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
APOBP04114 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC11.88□□□□□ -0.51
APOBP04114 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.88□□□□□ -0.51
APOBP04114 AC005104.2-201ENST00000427818 678 ntBASIC11.88□□□□□ -0.51
APOBP04114 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC11.88□□□□□ -0.51
APOBP04114 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC11.88□□□□□ -0.51
APOBP04114 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC11.88□□□□□ -0.51
APOBP04114 CDV3-207ENST00000508481 661 ntTSL 3 BASIC11.88□□□□□ -0.51
APOBP04114 AP001160.2-201ENST00000596071 487 ntBASIC11.88□□□□□ -0.51
APOBP04114 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC11.88□□□□□ -0.51
APOBP04114 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC11.88□□□□□ -0.51
APOBP04114 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
APOBP04114 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
APOBP04114 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC11.88□□□□□ -0.51
APOBP04114 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
APOBP04114 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.88□□□□□ -0.51
APOBP04114 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC11.88□□□□□ -0.51
APOBP04114 BID-212ENST00000614949 1988 ntTSL 5 BASIC11.88□□□□□ -0.51
APOBP04114 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC11.88□□□□□ -0.51
APOBP04114 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 FABP5-202ENST00000396359 986 ntTSL 5 BASIC11.88□□□□□ -0.51
APOBP04114 AC074051.2-201ENST00000565115 352 ntBASIC11.88□□□□□ -0.51
APOBP04114 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.88□□□□□ -0.51
APOBP04114 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOBP04114 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC11.88□□□□□ -0.51
APOBP04114 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC11.87□□□□□ -0.51
APOBP04114 AC112497.1-201ENST00000624824 639 ntBASIC11.87□□□□□ -0.51
APOBP04114 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOBP04114 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOBP04114 CSF3-203ENST00000394148 622 ntTSL 3 BASIC11.87□□□□□ -0.51
APOBP04114 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.87□□□□□ -0.51
APOBP04114 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC11.87□□□□□ -0.51
APOBP04114 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOBP04114 AL049840.3-201ENST00000602669 611 ntBASIC11.87□□□□□ -0.51
APOBP04114 AC099336.1-202ENST00000602961 463 ntBASIC11.87□□□□□ -0.51
APOBP04114 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.87□□□□□ -0.51
APOBP04114 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.87□□□□□ -0.51
APOBP04114 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOBP04114 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
APOBP04114 AL512408.1-201ENST00000569378 2000 ntBASIC11.87□□□□□ -0.51
APOBP04114 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
APOBP04114 AP001005.1-201ENST00000571755 1248 ntBASIC11.87□□□□□ -0.51
APOBP04114 FAM215A-202ENST00000632077 792 ntBASIC11.87□□□□□ -0.51
APOBP04114 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.87□□□□□ -0.51
APOBP04114 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC11.87□□□□□ -0.51
APOBP04114 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
APOBP04114 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOBP04114 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC11.87□□□□□ -0.51
APOBP04114 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOBP04114 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOBP04114 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOBP04114 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOBP04114 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC11.87□□□□□ -0.51
APOBP04114 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC11.87□□□□□ -0.51
APOBP04114 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOBP04114 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOBP04114 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
APOBP04114 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
APOBP04114 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.87□□□□□ -0.51
APOBP04114 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.87□□□□□ -0.51
APOBP04114 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.87□□□□□ -0.51
APOBP04114 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.87□□□□□ -0.51
APOBP04114 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
APOBP04114 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
APOBP04114 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
APOBP04114 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
APOBP04114 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
APOBP04114 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms