Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MT-ND1P03886 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.96■□□□□ 0.47
MT-ND1P03886 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MT-ND1P03886 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.96■□□□□ 0.47
MT-ND1P03886 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
MT-ND1P03886 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.96■□□□□ 0.47
MT-ND1P03886 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.96■□□□□ 0.47
MT-ND1P03886 CDCA4P2-201ENST00000441182 718 ntBASIC17.96■□□□□ 0.47
MT-ND1P03886 AF201337.1-201ENST00000520239 748 ntBASIC17.96■□□□□ 0.47
MT-ND1P03886 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.96■□□□□ 0.47
MT-ND1P03886 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MT-ND1P03886 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MT-ND1P03886 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MT-ND1P03886 MKRN4P-201ENST00000444706 1521 ntBASIC17.96■□□□□ 0.47
MT-ND1P03886 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.96■□□□□ 0.47
MT-ND1P03886 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MT-ND1P03886 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MT-ND1P03886 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MT-ND1P03886 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MT-ND1P03886 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
MT-ND1P03886 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
MT-ND1P03886 TFP1-202ENST00000475455 1573 ntBASIC17.96■□□□□ 0.46
MT-ND1P03886 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.96■□□□□ 0.46
MT-ND1P03886 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MT-ND1P03886 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.95■□□□□ 0.46
MT-ND1P03886 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.95■□□□□ 0.46
MT-ND1P03886 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.95■□□□□ 0.46
MT-ND1P03886 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
MT-ND1P03886 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
MT-ND1P03886 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.95■□□□□ 0.46
MT-ND1P03886 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MT-ND1P03886 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MT-ND1P03886 AC104417.2-201ENST00000562989 1793 ntBASIC17.94■□□□□ 0.46
MT-ND1P03886 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MT-ND1P03886 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
MT-ND1P03886 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 AC012313.1-201ENST00000593393 3059 ntBASIC17.94■□□□□ 0.46
MT-ND1P03886 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.94■□□□□ 0.46
MT-ND1P03886 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.94■□□□□ 0.46
MT-ND1P03886 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.94■□□□□ 0.46
MT-ND1P03886 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.94■□□□□ 0.46
MT-ND1P03886 AC026185.1-201ENST00000445748 174 ntBASIC17.94■□□□□ 0.46
MT-ND1P03886 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.94■□□□□ 0.46
MT-ND1P03886 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 AC105036.2-201ENST00000569468 176 ntBASIC17.94■□□□□ 0.46
MT-ND1P03886 AL137784.2-201ENST00000607332 1000 ntBASIC17.94■□□□□ 0.46
MT-ND1P03886 AL050303.2-201ENST00000619798 666 ntBASIC17.94■□□□□ 0.46
MT-ND1P03886 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
MT-ND1P03886 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MT-ND1P03886 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.94■□□□□ 0.46
MT-ND1P03886 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.94■□□□□ 0.46
MT-ND1P03886 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MT-ND1P03886 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.94■□□□□ 0.46
MT-ND1P03886 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.94■□□□□ 0.46
MT-ND1P03886 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms