Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN1O95832 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN1O95832 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLDN1O95832 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN1O95832 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLDN1O95832 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN1O95832 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN1O95832 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN1O95832 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN1O95832 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.99■□□□□ 0.31
CLDN1O95832 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN1O95832 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN1O95832 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.99■□□□□ 0.31
CLDN1O95832 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLDN1O95832 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN1O95832 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CLDN1O95832 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN1O95832 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CLDN1O95832 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
CLDN1O95832 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CLDN1O95832 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN1O95832 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN1O95832 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN1O95832 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN1O95832 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.98■□□□□ 0.31
CLDN1O95832 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN1O95832 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN1O95832 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.98■□□□□ 0.31
CLDN1O95832 SPDYE15P-201ENST00000424157 909 ntBASIC16.98■□□□□ 0.31
CLDN1O95832 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.98■□□□□ 0.31
CLDN1O95832 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.98■□□□□ 0.31
CLDN1O95832 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN1O95832 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.98■□□□□ 0.31
CLDN1O95832 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CLDN1O95832 AP005212.1-201ENST00000581547 1997 ntBASIC16.98■□□□□ 0.31
CLDN1O95832 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.98■□□□□ 0.31
CLDN1O95832 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN1O95832 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CLDN1O95832 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLDN1O95832 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.98■□□□□ 0.31
CLDN1O95832 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN1O95832 AC073314.1-201ENST00000568729 2216 ntBASIC16.97■□□□□ 0.31
CLDN1O95832 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN1O95832 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN1O95832 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN1O95832 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
CLDN1O95832 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN1O95832 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN1O95832 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.97■□□□□ 0.31
CLDN1O95832 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.97■□□□□ 0.31
CLDN1O95832 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.97■□□□□ 0.31
CLDN1O95832 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.97■□□□□ 0.31
CLDN1O95832 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLDN1O95832 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.97■□□□□ 0.31
CLDN1O95832 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN1O95832 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN1O95832 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN1O95832 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.97■□□□□ 0.31
CLDN1O95832 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN1O95832 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN1O95832 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN1O95832 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.97■□□□□ 0.31
CLDN1O95832 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN1O95832 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLDN1O95832 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN1O95832 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN1O95832 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CLDN1O95832 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN1O95832 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN1O95832 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN1O95832 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN1O95832 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN1O95832 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN1O95832 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.96■□□□□ 0.31
CLDN1O95832 EMBP1-201ENST00000458200 901 ntBASIC16.96■□□□□ 0.31
CLDN1O95832 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.96■□□□□ 0.31
CLDN1O95832 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN1O95832 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN1O95832 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.96■□□□□ 0.31
CLDN1O95832 IFNL4P1-201ENST00000607083 540 ntBASIC16.96■□□□□ 0.31
CLDN1O95832 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN1O95832 AL031008.1-201ENST00000619963 541 ntBASIC16.96■□□□□ 0.31
CLDN1O95832 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CLDN1O95832 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CLDN1O95832 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN1O95832 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLDN1O95832 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
CLDN1O95832 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CLDN1O95832 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CLDN1O95832 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CLDN1O95832 AC007225.1-201ENST00000566331 1836 ntBASIC16.96■□□□□ 0.3
CLDN1O95832 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.96■□□□□ 0.3
CLDN1O95832 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CLDN1O95832 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CLDN1O95832 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN1O95832 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN1O95832 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN1O95832 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN1O95832 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN1O95832 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms