Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC25.28■■□□□ 1.64
LTN1O94822 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTN1O94822 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTN1O94822 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
LTN1O94822 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC25.28■■□□□ 1.64
LTN1O94822 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC25.28■■□□□ 1.64
LTN1O94822 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC25.28■■□□□ 1.64
LTN1O94822 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTN1O94822 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC25.28■■□□□ 1.64
LTN1O94822 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
LTN1O94822 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC25.28■■□□□ 1.64
LTN1O94822 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LTN1O94822 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
LTN1O94822 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LTN1O94822 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LTN1O94822 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC25.27■■□□□ 1.64
LTN1O94822 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC25.27■■□□□ 1.64
LTN1O94822 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LTN1O94822 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LTN1O94822 AC092329.2-201ENST00000598402 547 ntBASIC25.27■■□□□ 1.64
LTN1O94822 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LTN1O94822 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LTN1O94822 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC25.27■■□□□ 1.64
LTN1O94822 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
LTN1O94822 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LTN1O94822 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC25.26■■□□□ 1.63
LTN1O94822 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
LTN1O94822 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LTN1O94822 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC25.26■■□□□ 1.63
LTN1O94822 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC25.26■■□□□ 1.63
LTN1O94822 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
LTN1O94822 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
LTN1O94822 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC25.26■■□□□ 1.63
LTN1O94822 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LTN1O94822 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
LTN1O94822 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC25.26■■□□□ 1.63
LTN1O94822 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
LTN1O94822 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
LTN1O94822 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
LTN1O94822 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
LTN1O94822 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC25.26■■□□□ 1.63
LTN1O94822 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
LTN1O94822 ELP6-205ENST00000439305 880 ntTSL 2 BASIC25.26■■□□□ 1.63
LTN1O94822 RNF126P1-202ENST00000569893 925 ntBASIC25.26■■□□□ 1.63
LTN1O94822 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC25.26■■□□□ 1.63
LTN1O94822 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC25.26■■□□□ 1.63
LTN1O94822 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC25.26■■□□□ 1.63
LTN1O94822 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC25.26■■□□□ 1.63
LTN1O94822 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LTN1O94822 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
LTN1O94822 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
LTN1O94822 KATNBL1P6-202ENST00000562413 1466 ntBASIC25.25■■□□□ 1.63
LTN1O94822 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC25.25■■□□□ 1.63
LTN1O94822 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LTN1O94822 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LTN1O94822 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC25.25■■□□□ 1.63
LTN1O94822 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
LTN1O94822 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LTN1O94822 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC25.25■■□□□ 1.63
LTN1O94822 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC25.25■■□□□ 1.63
LTN1O94822 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC25.25■■□□□ 1.63
LTN1O94822 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
LTN1O94822 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC25.25■■□□□ 1.63
LTN1O94822 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
LTN1O94822 HOXB1-202ENST00000577092 1414 ntBASIC25.25■■□□□ 1.63
LTN1O94822 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC25.24■■□□□ 1.63
LTN1O94822 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC25.24■■□□□ 1.63
LTN1O94822 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC25.24■■□□□ 1.63
LTN1O94822 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC25.24■■□□□ 1.63
LTN1O94822 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
LTN1O94822 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC25.24■■□□□ 1.63
LTN1O94822 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC25.24■■□□□ 1.63
LTN1O94822 AL691432.3-201ENST00000621860 400 ntBASIC25.24■■□□□ 1.63
LTN1O94822 PWWP2AP1-201ENST00000429776 2273 ntBASIC25.24■■□□□ 1.63
LTN1O94822 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LTN1O94822 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
LTN1O94822 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
LTN1O94822 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC25.23■■□□□ 1.63
LTN1O94822 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
LTN1O94822 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
LTN1O94822 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
LTN1O94822 KRT8P26-201ENST00000534154 1276 ntBASIC25.23■■□□□ 1.63
LTN1O94822 CIB2-208ENST00000560618 804 ntTSL 2 BASIC25.23■■□□□ 1.63
LTN1O94822 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LTN1O94822 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
LTN1O94822 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
LTN1O94822 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.23■■□□□ 1.63
LTN1O94822 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
LTN1O94822 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC25.23■■□□□ 1.63
LTN1O94822 RCC2P3-201ENST00000418112 1537 ntBASIC25.23■■□□□ 1.63
LTN1O94822 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
LTN1O94822 UBC-206ENST00000538617 1303 ntTSL 5 BASIC25.23■■□□□ 1.63
LTN1O94822 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
LTN1O94822 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LTN1O94822 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC25.23■■□□□ 1.63
LTN1O94822 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC25.23■■□□□ 1.63
LTN1O94822 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
LTN1O94822 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LTN1O94822 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LTN1O94822 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms