Protein–RNA interactions for Protein: O76075

DFFB, DNA fragmentation factor subunit beta, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFBO76075 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
DFFBO76075 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
DFFBO76075 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
DFFBO76075 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DFFBO76075 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.51■□□□□ 0.07
DFFBO76075 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DFFBO76075 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
DFFBO76075 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.5■□□□□ 0.07
DFFBO76075 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.5■□□□□ 0.07
DFFBO76075 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DFFBO76075 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.5■□□□□ 0.07
DFFBO76075 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DFFBO76075 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.5■□□□□ 0.07
DFFBO76075 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
DFFBO76075 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
DFFBO76075 FP475955.4-201ENST00000623131 1990 ntBASIC15.5■□□□□ 0.07
DFFBO76075 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
DFFBO76075 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
DFFBO76075 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DFFBO76075 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.5■□□□□ 0.07
DFFBO76075 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.5■□□□□ 0.07
DFFBO76075 AC007322.4-201ENST00000509611 723 ntBASIC15.5■□□□□ 0.07
DFFBO76075 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.5■□□□□ 0.07
DFFBO76075 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.5■□□□□ 0.07
DFFBO76075 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.5■□□□□ 0.07
DFFBO76075 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.5■□□□□ 0.07
DFFBO76075 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.5■□□□□ 0.07
DFFBO76075 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
DFFBO76075 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DFFBO76075 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
DFFBO76075 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.5■□□□□ 0.07
DFFBO76075 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.5■□□□□ 0.07
DFFBO76075 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DFFBO76075 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
DFFBO76075 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
DFFBO76075 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
DFFBO76075 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
DFFBO76075 AL512353.2-201ENST00000448759 1962 ntBASIC15.49■□□□□ 0.07
DFFBO76075 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
DFFBO76075 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.49■□□□□ 0.07
DFFBO76075 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DFFBO76075 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DFFBO76075 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DFFBO76075 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
DFFBO76075 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.49■□□□□ 0.07
DFFBO76075 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
DFFBO76075 IKBKGP1-201ENST00000612193 1073 ntBASIC15.49■□□□□ 0.07
DFFBO76075 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.49■□□□□ 0.07
DFFBO76075 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
DFFBO76075 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
DFFBO76075 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
DFFBO76075 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC15.49■□□□□ 0.07
DFFBO76075 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15.49■□□□□ 0.07
DFFBO76075 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
DFFBO76075 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
DFFBO76075 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.49■□□□□ 0.07
DFFBO76075 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.48■□□□□ 0.07
DFFBO76075 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
DFFBO76075 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
DFFBO76075 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
DFFBO76075 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
DFFBO76075 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
DFFBO76075 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 CNN2P6-201ENST00000439038 900 ntBASIC15.48■□□□□ 0.07
DFFBO76075 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.48■□□□□ 0.07
DFFBO76075 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 AC016405.3-201ENST00000607710 860 ntBASIC15.48■□□□□ 0.07
DFFBO76075 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.48■□□□□ 0.07
DFFBO76075 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
DFFBO76075 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.48■□□□□ 0.07
DFFBO76075 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.48■□□□□ 0.07
DFFBO76075 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.48■□□□□ 0.07
DFFBO76075 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
DFFBO76075 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
DFFBO76075 IRX1P1-201ENST00000438849 1838 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms