Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PFDN1O60925 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.07■□□□□ 0.32
PFDN1O60925 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PFDN1O60925 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.07■□□□□ 0.32
PFDN1O60925 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.07■□□□□ 0.32
PFDN1O60925 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.07■□□□□ 0.32
PFDN1O60925 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.07■□□□□ 0.32
PFDN1O60925 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PFDN1O60925 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PFDN1O60925 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.07■□□□□ 0.32
PFDN1O60925 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.07■□□□□ 0.32
PFDN1O60925 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PFDN1O60925 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PFDN1O60925 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.07■□□□□ 0.32
PFDN1O60925 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PFDN1O60925 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.07■□□□□ 0.32
PFDN1O60925 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
PFDN1O60925 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PFDN1O60925 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PFDN1O60925 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PFDN1O60925 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN1O60925 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN1O60925 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN1O60925 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.06■□□□□ 0.32
PFDN1O60925 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN1O60925 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PFDN1O60925 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN1O60925 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN1O60925 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
PFDN1O60925 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
PFDN1O60925 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PFDN1O60925 MIR3648-2-201ENST00000581792 180 ntBASIC17.06■□□□□ 0.32
PFDN1O60925 MIR3648-1-201ENST00000615959 180 ntBASIC17.06■□□□□ 0.32
PFDN1O60925 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PFDN1O60925 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PFDN1O60925 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN1O60925 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PFDN1O60925 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.06■□□□□ 0.32
PFDN1O60925 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.06■□□□□ 0.32
PFDN1O60925 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.06■□□□□ 0.32
PFDN1O60925 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.06■□□□□ 0.32
PFDN1O60925 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN1O60925 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.06■□□□□ 0.32
PFDN1O60925 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PFDN1O60925 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.06■□□□□ 0.32
PFDN1O60925 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.05■□□□□ 0.32
PFDN1O60925 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.05■□□□□ 0.32
PFDN1O60925 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.05■□□□□ 0.32
PFDN1O60925 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.05■□□□□ 0.32
PFDN1O60925 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PFDN1O60925 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PFDN1O60925 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms