Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
BRD4O60885 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC26.35■■□□□ 1.81
BRD4O60885 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC26.35■■□□□ 1.81
BRD4O60885 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
BRD4O60885 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC26.34■■□□□ 1.81
BRD4O60885 PCED1CP-201ENST00000419887 785 ntBASIC26.34■■□□□ 1.81
BRD4O60885 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
BRD4O60885 AL671277.2-201ENST00000458060 996 ntBASIC26.34■■□□□ 1.81
BRD4O60885 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC26.34■■□□□ 1.81
BRD4O60885 AC116407.4-201ENST00000623319 1061 ntBASIC26.34■■□□□ 1.81
BRD4O60885 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC26.34■■□□□ 1.81
BRD4O60885 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
BRD4O60885 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
BRD4O60885 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
BRD4O60885 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
BRD4O60885 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
BRD4O60885 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC26.34■■□□□ 1.81
BRD4O60885 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC26.33■■□□□ 1.81
BRD4O60885 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC26.33■■□□□ 1.81
BRD4O60885 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BRD4O60885 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC26.33■■□□□ 1.81
BRD4O60885 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC26.33■■□□□ 1.81
BRD4O60885 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC26.33■■□□□ 1.81
BRD4O60885 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC26.33■■□□□ 1.81
BRD4O60885 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC26.33■■□□□ 1.81
BRD4O60885 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC26.33■■□□□ 1.81
BRD4O60885 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BRD4O60885 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC26.33■■□□□ 1.81
BRD4O60885 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
BRD4O60885 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC26.33■■□□□ 1.81
BRD4O60885 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC26.33■■□□□ 1.81
BRD4O60885 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BRD4O60885 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
BRD4O60885 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BRD4O60885 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC26.33■■□□□ 1.81
BRD4O60885 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BRD4O60885 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
BRD4O60885 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
BRD4O60885 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
BRD4O60885 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
BRD4O60885 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
BRD4O60885 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
BRD4O60885 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
BRD4O60885 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
BRD4O60885 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC26.33■■□□□ 1.8
BRD4O60885 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.8
BRD4O60885 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
BRD4O60885 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
BRD4O60885 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC26.33■■□□□ 1.8
BRD4O60885 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC26.33■■□□□ 1.8
BRD4O60885 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
BRD4O60885 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
BRD4O60885 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BRD4O60885 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
BRD4O60885 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
BRD4O60885 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
BRD4O60885 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC26.32■■□□□ 1.8
BRD4O60885 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BRD4O60885 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BRD4O60885 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BRD4O60885 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
BRD4O60885 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
BRD4O60885 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
BRD4O60885 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
BRD4O60885 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
BRD4O60885 CD320-202ENST00000537716 1119 ntTSL 2 BASIC26.32■■□□□ 1.8
BRD4O60885 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC26.32■■□□□ 1.8
BRD4O60885 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
BRD4O60885 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
BRD4O60885 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC26.32■■□□□ 1.8
BRD4O60885 AL023973.1-201ENST00000624619 620 ntBASIC26.32■■□□□ 1.8
BRD4O60885 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
BRD4O60885 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
BRD4O60885 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
BRD4O60885 IER3-202ENST00000376377 1350 ntBASIC26.31■■□□□ 1.8
BRD4O60885 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
BRD4O60885 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
BRD4O60885 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC26.31■■□□□ 1.8
BRD4O60885 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
BRD4O60885 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
BRD4O60885 KRT8P11-201ENST00000409686 1436 ntBASIC26.31■■□□□ 1.8
BRD4O60885 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
BRD4O60885 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
BRD4O60885 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
BRD4O60885 ETFA-216ENST00000560726 942 ntTSL 3 BASIC26.31■■□□□ 1.8
BRD4O60885 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC26.31■■□□□ 1.8
BRD4O60885 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
BRD4O60885 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC26.3■■□□□ 1.8
BRD4O60885 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
BRD4O60885 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC26.3■■□□□ 1.8
BRD4O60885 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
BRD4O60885 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
BRD4O60885 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
BRD4O60885 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC26.3■■□□□ 1.8
BRD4O60885 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
BRD4O60885 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
BRD4O60885 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
BRD4O60885 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
BRD4O60885 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
BRD4O60885 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms