Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEF4O60810 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.33■□□□□ 0.52
PRAMEF4O60810 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF4O60810 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF4O60810 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRAMEF4O60810 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PRAMEF4O60810 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.33■□□□□ 0.52
PRAMEF4O60810 AL138781.2-201ENST00000617896 1843 ntBASIC18.33■□□□□ 0.52
PRAMEF4O60810 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF4O60810 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF4O60810 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF4O60810 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF4O60810 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF4O60810 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF4O60810 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF4O60810 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRAMEF4O60810 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 AC026271.3-201ENST00000571884 352 ntBASIC18.32■□□□□ 0.52
PRAMEF4O60810 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 AC011298.2-201ENST00000617989 482 ntBASIC18.32■□□□□ 0.52
PRAMEF4O60810 AC093525.10-201ENST00000625130 1569 ntBASIC18.32■□□□□ 0.52
PRAMEF4O60810 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.32■□□□□ 0.52
PRAMEF4O60810 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 AL512353.2-201ENST00000448759 1962 ntBASIC18.31■□□□□ 0.52
PRAMEF4O60810 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 AC233702.5-201ENST00000584107 538 ntBASIC18.31■□□□□ 0.52
PRAMEF4O60810 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 MIR6786-201ENST00000616843 113 ntBASIC18.31■□□□□ 0.52
PRAMEF4O60810 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 TMEM191A-211ENST00000637163 1067 ntBASIC18.31■□□□□ 0.52
PRAMEF4O60810 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.31■□□□□ 0.52
PRAMEF4O60810 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRAMEF4O60810 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
PRAMEF4O60810 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRAMEF4O60810 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
PRAMEF4O60810 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.3■□□□□ 0.52
PRAMEF4O60810 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
PRAMEF4O60810 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRAMEF4O60810 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.3■□□□□ 0.52
PRAMEF4O60810 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.3■□□□□ 0.52
PRAMEF4O60810 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PRAMEF4O60810 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.3■□□□□ 0.52
PRAMEF4O60810 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PRAMEF4O60810 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRAMEF4O60810 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEF4O60810 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms