Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.83■□□□□ 0.28
GMDSO60547 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.83■□□□□ 0.28
GMDSO60547 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.83■□□□□ 0.28
GMDSO60547 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.83■□□□□ 0.28
GMDSO60547 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.83■□□□□ 0.28
GMDSO60547 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.83■□□□□ 0.28
GMDSO60547 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.83■□□□□ 0.28
GMDSO60547 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
GMDSO60547 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GMDSO60547 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GMDSO60547 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GMDSO60547 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.83■□□□□ 0.28
GMDSO60547 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
GMDSO60547 AL121829.2-201ENST00000620908 328 ntBASIC16.83■□□□□ 0.28
GMDSO60547 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
GMDSO60547 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
GMDSO60547 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
GMDSO60547 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
GMDSO60547 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.82■□□□□ 0.28
GMDSO60547 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.82■□□□□ 0.28
GMDSO60547 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
GMDSO60547 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.82■□□□□ 0.28
GMDSO60547 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.82■□□□□ 0.28
GMDSO60547 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.82■□□□□ 0.28
GMDSO60547 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.82■□□□□ 0.28
GMDSO60547 AP003097.1-201ENST00000530657 1135 ntBASIC16.82■□□□□ 0.28
GMDSO60547 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.82■□□□□ 0.28
GMDSO60547 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.82■□□□□ 0.28
GMDSO60547 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.82■□□□□ 0.28
GMDSO60547 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.82■□□□□ 0.28
GMDSO60547 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.82■□□□□ 0.28
GMDSO60547 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
GMDSO60547 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.82■□□□□ 0.28
GMDSO60547 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GMDSO60547 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.82■□□□□ 0.28
GMDSO60547 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GMDSO60547 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GMDSO60547 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GMDSO60547 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
GMDSO60547 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.81■□□□□ 0.28
GMDSO60547 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.81■□□□□ 0.28
GMDSO60547 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GMDSO60547 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.81■□□□□ 0.28
GMDSO60547 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GMDSO60547 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.81■□□□□ 0.28
GMDSO60547 KRT17P3-201ENST00000420566 1262 ntBASIC16.81■□□□□ 0.28
GMDSO60547 POM121L13P-201ENST00000422362 380 ntBASIC16.81■□□□□ 0.28
GMDSO60547 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.81■□□□□ 0.28
GMDSO60547 AC026366.1-201ENST00000488803 879 ntBASIC16.81■□□□□ 0.28
GMDSO60547 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
GMDSO60547 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
GMDSO60547 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.81■□□□□ 0.28
GMDSO60547 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.81■□□□□ 0.28
GMDSO60547 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GMDSO60547 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
GMDSO60547 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GMDSO60547 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GMDSO60547 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GMDSO60547 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.8■□□□□ 0.28
GMDSO60547 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GMDSO60547 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GMDSO60547 AC124283.5-201ENST00000624661 1809 ntBASIC16.8■□□□□ 0.28
GMDSO60547 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GMDSO60547 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.8■□□□□ 0.28
GMDSO60547 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GMDSO60547 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GMDSO60547 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
GMDSO60547 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms