Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CREB3O43889 AC233702.5-201ENST00000584107 538 ntBASIC19.85■□□□□ 0.77
CREB3O43889 AL031985.4-201ENST00000642138 673 ntBASIC19.85■□□□□ 0.77
CREB3O43889 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CREB3O43889 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CREB3O43889 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CREB3O43889 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CREB3O43889 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CREB3O43889 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.85■□□□□ 0.77
CREB3O43889 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.85■□□□□ 0.77
CREB3O43889 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.84■□□□□ 0.77
CREB3O43889 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CREB3O43889 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CREB3O43889 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CREB3O43889 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CREB3O43889 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CREB3O43889 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CREB3O43889 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CREB3O43889 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CREB3O43889 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.84■□□□□ 0.77
CREB3O43889 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CREB3O43889 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.84■□□□□ 0.77
CREB3O43889 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.84■□□□□ 0.77
CREB3O43889 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CREB3O43889 AP001412.1-201ENST00000608405 714 ntBASIC19.84■□□□□ 0.77
CREB3O43889 AC113410.3-201ENST00000623366 203 ntBASIC19.84■□□□□ 0.77
CREB3O43889 AL049637.2-201ENST00000641778 930 ntBASIC19.84■□□□□ 0.77
CREB3O43889 KRT8P41-201ENST00000533985 1514 ntBASIC19.84■□□□□ 0.77
CREB3O43889 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CREB3O43889 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CREB3O43889 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CREB3O43889 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CREB3O43889 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
CREB3O43889 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.84■□□□□ 0.77
CREB3O43889 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CREB3O43889 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.84■□□□□ 0.77
CREB3O43889 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.84■□□□□ 0.77
CREB3O43889 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.84■□□□□ 0.77
CREB3O43889 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
CREB3O43889 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CREB3O43889 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CREB3O43889 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CREB3O43889 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.83■□□□□ 0.77
CREB3O43889 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CREB3O43889 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CREB3O43889 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CREB3O43889 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CREB3O43889 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CREB3O43889 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CREB3O43889 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CREB3O43889 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.83■□□□□ 0.77
CREB3O43889 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.83■□□□□ 0.77
CREB3O43889 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CREB3O43889 MIR718-201ENST00000390190 70 ntBASIC19.83■□□□□ 0.77
CREB3O43889 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CREB3O43889 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CREB3O43889 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CREB3O43889 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.83■□□□□ 0.77
CREB3O43889 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CREB3O43889 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CREB3O43889 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CREB3O43889 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CREB3O43889 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
CREB3O43889 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CREB3O43889 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CREB3O43889 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.83■□□□□ 0.76
CREB3O43889 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CREB3O43889 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CREB3O43889 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.83■□□□□ 0.76
CREB3O43889 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CREB3O43889 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.83■□□□□ 0.76
CREB3O43889 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CREB3O43889 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.82■□□□□ 0.76
CREB3O43889 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CREB3O43889 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CREB3O43889 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CREB3O43889 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.82■□□□□ 0.76
CREB3O43889 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.82■□□□□ 0.76
CREB3O43889 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CREB3O43889 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CREB3O43889 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.82■□□□□ 0.76
CREB3O43889 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.82■□□□□ 0.76
CREB3O43889 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.82■□□□□ 0.76
CREB3O43889 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.82■□□□□ 0.76
CREB3O43889 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CREB3O43889 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CREB3O43889 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.82■□□□□ 0.76
CREB3O43889 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CREB3O43889 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.82■□□□□ 0.76
CREB3O43889 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.82■□□□□ 0.76
CREB3O43889 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CREB3O43889 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CREB3O43889 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CREB3O43889 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CREB3O43889 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CREB3O43889 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CREB3O43889 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.82■□□□□ 0.76
CREB3O43889 RCC2P6-201ENST00000526625 1557 ntBASIC19.82■□□□□ 0.76
CREB3O43889 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CREB3O43889 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms