Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.2■□□□□ 0.34
SURF4O15260 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.2■□□□□ 0.34
SURF4O15260 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.2■□□□□ 0.34
SURF4O15260 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.2■□□□□ 0.34
SURF4O15260 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 TUBB8P6-201ENST00000436895 1288 ntBASIC17.2■□□□□ 0.34
SURF4O15260 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.2■□□□□ 0.34
SURF4O15260 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.2■□□□□ 0.34
SURF4O15260 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.2■□□□□ 0.34
SURF4O15260 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
SURF4O15260 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SURF4O15260 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 AC020763.4-201ENST00000623414 4170 ntBASIC17.2■□□□□ 0.34
SURF4O15260 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SURF4O15260 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SURF4O15260 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SURF4O15260 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.19■□□□□ 0.34
SURF4O15260 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.19■□□□□ 0.34
SURF4O15260 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.19■□□□□ 0.34
SURF4O15260 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SURF4O15260 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.19■□□□□ 0.34
SURF4O15260 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SURF4O15260 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SURF4O15260 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 AC092368.3-202ENST00000574180 1591 ntBASIC17.19■□□□□ 0.34
SURF4O15260 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SURF4O15260 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.18■□□□□ 0.34
SURF4O15260 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SURF4O15260 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SURF4O15260 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.18■□□□□ 0.34
SURF4O15260 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.18■□□□□ 0.34
SURF4O15260 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SURF4O15260 AC018470.1-201ENST00000624790 3129 ntBASIC17.18■□□□□ 0.34
SURF4O15260 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.18■□□□□ 0.34
SURF4O15260 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.18■□□□□ 0.34
SURF4O15260 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
SURF4O15260 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.18■□□□□ 0.34
SURF4O15260 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 MYC-209ENST00000641252 345 ntBASIC17.18■□□□□ 0.34
SURF4O15260 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SURF4O15260 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.18■□□□□ 0.34
SURF4O15260 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.18■□□□□ 0.34
SURF4O15260 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
SURF4O15260 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SURF4O15260 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.17■□□□□ 0.34
SURF4O15260 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.17■□□□□ 0.34
SURF4O15260 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SURF4O15260 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SURF4O15260 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SURF4O15260 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.17■□□□□ 0.34
SURF4O15260 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SURF4O15260 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SURF4O15260 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SURF4O15260 AC005332.8-201ENST00000622750 2735 ntBASIC17.17■□□□□ 0.34
SURF4O15260 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SURF4O15260 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SURF4O15260 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SURF4O15260 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms