Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.1■□□□□ 0.81
CAPN9O14815 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.1■□□□□ 0.81
CAPN9O14815 AC116562.4-201ENST00000641316 2276 ntBASIC20.1■□□□□ 0.81
CAPN9O14815 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.1■□□□□ 0.81
CAPN9O14815 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CAPN9O14815 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CAPN9O14815 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.1■□□□□ 0.81
CAPN9O14815 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.1■□□□□ 0.81
CAPN9O14815 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.1■□□□□ 0.81
CAPN9O14815 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.1■□□□□ 0.81
CAPN9O14815 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.1■□□□□ 0.81
CAPN9O14815 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CAPN9O14815 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CAPN9O14815 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.1■□□□□ 0.81
CAPN9O14815 REXO1L10P-201ENST00000615707 1290 ntBASIC20.1■□□□□ 0.81
CAPN9O14815 REXO1L12P-201ENST00000622156 912 ntBASIC20.1■□□□□ 0.81
CAPN9O14815 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CAPN9O14815 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CAPN9O14815 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN9O14815 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CAPN9O14815 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CAPN9O14815 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN9O14815 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CAPN9O14815 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN9O14815 AC011506.1-201ENST00000474329 610 ntBASIC20.09■□□□□ 0.81
CAPN9O14815 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.09■□□□□ 0.81
CAPN9O14815 AC116562.2-201ENST00000507042 360 ntBASIC20.09■□□□□ 0.81
CAPN9O14815 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.09■□□□□ 0.81
CAPN9O14815 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.09■□□□□ 0.81
CAPN9O14815 AL032819.2-201ENST00000624543 2162 ntBASIC20.09■□□□□ 0.81
CAPN9O14815 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN9O14815 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.09■□□□□ 0.81
CAPN9O14815 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN9O14815 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN9O14815 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN9O14815 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN9O14815 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN9O14815 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.09■□□□□ 0.81
CAPN9O14815 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN9O14815 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN9O14815 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.09■□□□□ 0.81
CAPN9O14815 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CAPN9O14815 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.09■□□□□ 0.81
CAPN9O14815 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN9O14815 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN9O14815 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN9O14815 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN9O14815 KRT8P41-201ENST00000533985 1514 ntBASIC20.08■□□□□ 0.81
CAPN9O14815 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN9O14815 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN9O14815 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN9O14815 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN9O14815 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN9O14815 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN9O14815 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN9O14815 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN9O14815 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.08■□□□□ 0.81
CAPN9O14815 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CAPN9O14815 AC091390.4-202ENST00000476426 537 ntBASIC20.08■□□□□ 0.81
CAPN9O14815 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN9O14815 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.08■□□□□ 0.81
CAPN9O14815 AC130371.2-201ENST00000619443 611 ntBASIC20.08■□□□□ 0.81
CAPN9O14815 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN9O14815 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN9O14815 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN9O14815 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CAPN9O14815 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN9O14815 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.08■□□□□ 0.8
CAPN9O14815 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CAPN9O14815 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.07■□□□□ 0.8
CAPN9O14815 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN9O14815 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
CAPN9O14815 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN9O14815 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CAPN9O14815 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.07■□□□□ 0.8
CAPN9O14815 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.07■□□□□ 0.8
CAPN9O14815 FAM207BP-201ENST00000447172 505 ntBASIC20.07■□□□□ 0.8
CAPN9O14815 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CAPN9O14815 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN9O14815 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CAPN9O14815 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN9O14815 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN9O14815 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN9O14815 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN9O14815 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN9O14815 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN9O14815 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms