Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
UBFD1O14562 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UBFD1O14562 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.5■□□□□ 0.55
UBFD1O14562 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.5■□□□□ 0.55
UBFD1O14562 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 TSPY21P-201ENST00000433481 731 ntBASIC18.5■□□□□ 0.55
UBFD1O14562 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.5■□□□□ 0.55
UBFD1O14562 AL160286.2-201ENST00000567150 934 ntBASIC18.5■□□□□ 0.55
UBFD1O14562 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UBFD1O14562 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
UBFD1O14562 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UBFD1O14562 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UBFD1O14562 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.49■□□□□ 0.55
UBFD1O14562 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBFD1O14562 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBFD1O14562 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.49■□□□□ 0.55
UBFD1O14562 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
UBFD1O14562 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.49■□□□□ 0.55
UBFD1O14562 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBFD1O14562 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBFD1O14562 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBFD1O14562 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.49■□□□□ 0.55
UBFD1O14562 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.49■□□□□ 0.55
UBFD1O14562 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.49■□□□□ 0.55
UBFD1O14562 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.49■□□□□ 0.55
UBFD1O14562 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.49■□□□□ 0.55
UBFD1O14562 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.49■□□□□ 0.55
UBFD1O14562 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBFD1O14562 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBFD1O14562 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBFD1O14562 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBFD1O14562 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
UBFD1O14562 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.49■□□□□ 0.55
UBFD1O14562 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBFD1O14562 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UBFD1O14562 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
UBFD1O14562 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.49■□□□□ 0.55
UBFD1O14562 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
UBFD1O14562 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBFD1O14562 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBFD1O14562 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.48■□□□□ 0.55
UBFD1O14562 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.48■□□□□ 0.55
UBFD1O14562 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBFD1O14562 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
UBFD1O14562 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBFD1O14562 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.48■□□□□ 0.55
UBFD1O14562 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.48■□□□□ 0.55
UBFD1O14562 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBFD1O14562 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.48■□□□□ 0.55
UBFD1O14562 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.48■□□□□ 0.55
UBFD1O14562 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBFD1O14562 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.48■□□□□ 0.55
UBFD1O14562 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
UBFD1O14562 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
UBFD1O14562 KRT8P41-201ENST00000533985 1514 ntBASIC18.48■□□□□ 0.55
UBFD1O14562 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UBFD1O14562 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.48■□□□□ 0.55
UBFD1O14562 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.48■□□□□ 0.55
UBFD1O14562 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.48■□□□□ 0.55
UBFD1O14562 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UBFD1O14562 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
UBFD1O14562 AL354751.1-201ENST00000412768 1863 ntBASIC18.48■□□□□ 0.55
UBFD1O14562 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBFD1O14562 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBFD1O14562 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.47■□□□□ 0.55
UBFD1O14562 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
UBFD1O14562 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
UBFD1O14562 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBFD1O14562 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBFD1O14562 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBFD1O14562 PRKY-204ENST00000533551 1019 ntBASIC18.47■□□□□ 0.55
UBFD1O14562 AC233263.1-201ENST00000578059 224 ntBASIC18.47■□□□□ 0.55
UBFD1O14562 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBFD1O14562 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBFD1O14562 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBFD1O14562 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UBFD1O14562 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.47■□□□□ 0.55
UBFD1O14562 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.47■□□□□ 0.55
UBFD1O14562 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UBFD1O14562 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBFD1O14562 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.47■□□□□ 0.55
UBFD1O14562 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBFD1O14562 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBFD1O14562 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
UBFD1O14562 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBFD1O14562 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBFD1O14562 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UBFD1O14562 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
UBFD1O14562 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBFD1O14562 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms