Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EIF3FO00303 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
EIF3FO00303 AC093525.10-201ENST00000625130 1569 ntBASIC18.64■□□□□ 0.58
EIF3FO00303 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
EIF3FO00303 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.64■□□□□ 0.57
EIF3FO00303 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EIF3FO00303 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.64■□□□□ 0.57
EIF3FO00303 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EIF3FO00303 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EIF3FO00303 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EIF3FO00303 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.64■□□□□ 0.57
EIF3FO00303 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.64■□□□□ 0.57
EIF3FO00303 AC083906.6-201ENST00000641366 219 ntBASIC18.64■□□□□ 0.57
EIF3FO00303 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EIF3FO00303 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EIF3FO00303 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
EIF3FO00303 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EIF3FO00303 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
EIF3FO00303 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EIF3FO00303 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
EIF3FO00303 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.64■□□□□ 0.57
EIF3FO00303 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EIF3FO00303 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.63■□□□□ 0.57
EIF3FO00303 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.63■□□□□ 0.57
EIF3FO00303 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
EIF3FO00303 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
EIF3FO00303 FAM197Y1-201ENST00000421178 764 ntBASIC18.63■□□□□ 0.57
EIF3FO00303 FAM207BP-201ENST00000447172 505 ntBASIC18.63■□□□□ 0.57
EIF3FO00303 AC116562.2-201ENST00000507042 360 ntBASIC18.63■□□□□ 0.57
EIF3FO00303 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 NUDT16P1-203ENST00000513809 620 ntBASIC18.63■□□□□ 0.57
EIF3FO00303 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.63■□□□□ 0.57
EIF3FO00303 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 CKBP1-201ENST00000565489 1086 ntBASIC18.63■□□□□ 0.57
EIF3FO00303 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
EIF3FO00303 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.63■□□□□ 0.57
EIF3FO00303 TMEM191A-211ENST00000637163 1067 ntBASIC18.63■□□□□ 0.57
EIF3FO00303 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.63■□□□□ 0.57
EIF3FO00303 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.63■□□□□ 0.57
EIF3FO00303 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.63■□□□□ 0.57
EIF3FO00303 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.63■□□□□ 0.57
EIF3FO00303 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
EIF3FO00303 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.63■□□□□ 0.57
EIF3FO00303 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
EIF3FO00303 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EIF3FO00303 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.62■□□□□ 0.57
EIF3FO00303 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
EIF3FO00303 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 MESTP1-201ENST00000404287 994 ntBASIC18.62■□□□□ 0.57
EIF3FO00303 AC011506.1-201ENST00000474329 610 ntBASIC18.62■□□□□ 0.57
EIF3FO00303 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.62■□□□□ 0.57
EIF3FO00303 AP000692.2-201ENST00000608391 879 ntBASIC18.62■□□□□ 0.57
EIF3FO00303 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
EIF3FO00303 AL049637.2-201ENST00000641778 930 ntBASIC18.62■□□□□ 0.57
EIF3FO00303 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.62■□□□□ 0.57
EIF3FO00303 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
EIF3FO00303 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.62■□□□□ 0.57
EIF3FO00303 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EIF3FO00303 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.62■□□□□ 0.57
EIF3FO00303 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
EIF3FO00303 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EIF3FO00303 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EIF3FO00303 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EIF3FO00303 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EIF3FO00303 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.61■□□□□ 0.57
EIF3FO00303 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
EIF3FO00303 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
EIF3FO00303 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EIF3FO00303 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EIF3FO00303 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EIF3FO00303 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
EIF3FO00303 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.61■□□□□ 0.57
EIF3FO00303 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.61■□□□□ 0.57
EIF3FO00303 KRT8P3-201ENST00000519669 1449 ntBASIC18.61■□□□□ 0.57
EIF3FO00303 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms