Protein–RNA interactions for Protein: A2A2Y4

FRMD3, FERM domain-containing protein 3, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD3A2A2Y4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
FRMD3A2A2Y4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 AP000692.2-201ENST00000608391 879 ntBASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
FRMD3A2A2Y4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.08■□□□□ 0.97
FRMD3A2A2Y4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FRMD3A2A2Y4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.08■□□□□ 0.96
FRMD3A2A2Y4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
FRMD3A2A2Y4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
FRMD3A2A2Y4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
FRMD3A2A2Y4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
FRMD3A2A2Y4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 FAM207BP-201ENST00000447172 505 ntBASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 CKBP1-201ENST00000565489 1086 ntBASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 CROCCP3-202ENST00000420820 1947 ntBASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
FRMD3A2A2Y4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 DGCR10-201ENST00000609839 495 ntBASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 REXO1L10P-201ENST00000615707 1290 ntBASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 REXO1L12P-201ENST00000622156 912 ntBASIC21.06■□□□□ 0.96
FRMD3A2A2Y4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms