Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AC087499.1-201ENST00000418141 1075 ntBASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 KSR1P1-201ENST00000446298 240 ntBASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.32■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 NUDT16P1-203ENST00000513809 620 ntBASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 KRT16P1-201ENST00000399124 1418 ntBASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 MMP23A-201ENST00000234610 1017 ntBASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 NIFKP9-201ENST00000419265 221 ntBASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TUBB8P6-201ENST00000436895 1288 ntBASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 YBX1P10-201ENST00000444752 975 ntBASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms