Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 AC135050.7-201ENST00000624508 2218 ntBASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 RPS2P52-201ENST00000469610 820 ntBASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 AC097658.1-201ENST00000475555 843 ntBASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF103-CHMP3A0A140T963 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
RNF103-CHMP3A0A140T963 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF103-CHMP3A0A140T963 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF103-CHMP3A0A140T963 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.33■□□□□ 0.53
RNF103-CHMP3A0A140T963 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF103-CHMP3A0A140T963 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.33■□□□□ 0.53
RNF103-CHMP3A0A140T963 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF103-CHMP3A0A140T963 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF103-CHMP3A0A140T963 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF103-CHMP3A0A140T963 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RNF103-CHMP3A0A140T963 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF103-CHMP3A0A140T963 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF103-CHMP3A0A140T963 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC098934.4-201ENST00000564127 592 ntBASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 HLA-B-256ENST00000639848 1089 ntBASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 MYC-209ENST00000641252 345 ntBASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF103-CHMP3A0A140T963 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 AL133373.2-201ENST00000623187 2828 ntBASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF103-CHMP3A0A140T963 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF103-CHMP3A0A140T963 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms