Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 KRT18P11-201ENST00000435214 1283 ntBASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 ANO7L1-203ENST00000602586 1720 ntBASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV18A0A075B6X5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 AC069236.1-201ENST00000604339 616 ntBASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV18A0A075B6X5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 ABALON-201ENST00000629058 1903 ntBASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 CNN2P6-201ENST00000439038 900 ntBASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 NTF6G-201ENST00000591094 616 ntBASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 AC008694.1-202ENST00000636953 945 ntBASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV18A0A075B6X5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRAV18A0A075B6X5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms