Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 NFKB1-212ENST00000600343 4010 ntTSL 2 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 SPRR2C-201ENST00000290702 219 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 SNORA2.1-201ENST00000363089 137 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNU1-21P-201ENST00000363327 163 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNA5SP50-201ENST00000363731 107 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 SNORA30-201ENST00000384028 129 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNU6-163P-201ENST00000384396 106 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNA5SP237-201ENST00000410414 113 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 AL451105.1-201ENST00000450005 189 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 AL122020.1-201ENST00000472287 459 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 RN7SL12P-201ENST00000473849 290 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 AC083982.1-201ENST00000485679 344 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 AC116353.1-201ENST00000489727 316 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 RN7SL812P-201ENST00000493791 279 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 RN7SL416P-201ENST00000494042 298 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 SNORA4.4-201ENST00000515921 135 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNA5SP164-201ENST00000516533 110 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNU7-28P-201ENST00000516759 62 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 AC079598.5-201ENST00000547460 117 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 IGHV1OR15-4-201ENST00000560037 348 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 AC090699.1-201ENST00000586264 321 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 TUG1_3.1-201ENST00000616187 237 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 AC027279.3-201ENST00000625055 122 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 AC134981.1-201ENST00000628076 348 ntBASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 CSF3R-203ENST00000373103 3454 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 POT1-202ENST00000393329 3950 ntTSL 5 BASIC2.33□□□□□ -2.04
KRTAP9-4Q9BYQ2 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 LPP-208ENST00000448637 5835 ntTSL 5 BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 FAM205BP-202ENST00000399773 4009 ntBASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 AP003122.5-201ENST00000527668 3766 ntBASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP9-4Q9BYQ2 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms