Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 RPL21P7-201ENST00000557463 483 ntBASIC4.38□□□□□ -1.71
SNX11Q9Y5W9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX11Q9Y5W9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX11Q9Y5W9 MIR4643-201ENST00000577473 78 ntBASIC4.38□□□□□ -1.71
SNX11Q9Y5W9 MIR4300-201ENST00000581016 96 ntBASIC4.38□□□□□ -1.71
SNX11Q9Y5W9 MIR92B-201ENST00000607575 96 ntBASIC4.38□□□□□ -1.71
SNX11Q9Y5W9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX11Q9Y5W9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX11Q9Y5W9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX11Q9Y5W9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX11Q9Y5W9 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNX11Q9Y5W9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.38□□□□□ -1.71
SNX11Q9Y5W9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX11Q9Y5W9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 AC092435.4-201ENST00000623012 4159 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 RNU6-512P-201ENST00000364438 103 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 RNU6-628P-201ENST00000410675 107 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 Z74021.1-201ENST00000423610 407 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 AC073587.1-201ENST00000447093 876 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 RNU7-87P-201ENST00000459343 62 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 RN7SL817P-201ENST00000480777 288 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 AC020593.1-201ENST00000507399 299 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 AL359273.1-201ENST00000510918 627 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 SERF1AP1-201ENST00000514575 187 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 MIR892C-201ENST00000516410 77 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 AC022868.1-201ENST00000517767 391 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 AC009314.1-201ENST00000603871 304 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 AC140113.4-201ENST00000622087 222 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 HAUS6P2-201ENST00000433254 2404 ntBASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX11Q9Y5W9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 AC090740.1-201ENST00000623193 2262 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 Y_RNA.199-201ENST00000364014 102 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 RNA5SP240-201ENST00000365355 128 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 Y_RNA.358-201ENST00000365491 99 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 RNU6-827P-201ENST00000365553 106 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 RNU6-76P-201ENST00000384060 104 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 SNORA11F-201ENST00000408237 128 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 Y_RNA.602-201ENST00000410535 92 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 AC009237.10-201ENST00000414112 510 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 AC087650.1-201ENST00000431445 468 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 MTCO3P29-201ENST00000432119 779 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 USP9YP7-201ENST00000436723 430 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 RPL23AP52-201ENST00000439311 478 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 USP9YP32-201ENST00000452432 430 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 HMGN1P11-201ENST00000508668 303 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 SYF2P1-201ENST00000550658 413 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 TRAV37-201ENST00000553906 342 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 AC140479.6-201ENST00000633535 357 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 U6.92-201ENST00000636464 89 ntBASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX11Q9Y5W9 SCN1A-220ENST00000641603 12506 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 NCAPGP1-201ENST00000505112 1814 ntBASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX11Q9Y5W9 MIR372-201ENST00000362225 67 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms