RNA–Protein interactions for RNA: ENST00000553906.1

TRAV37-201, Transcript of T cell receptor alpha variable 37 (pseudogene), humanhuman

BASIC

Gene TRAV37, Length 342 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV37-201ENST00000553906 AEBP2Q6ZN18 517 aaPredicted RBP13.81□□□□□ -0.2
TRAV37-201ENST00000553906 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
TRAV37-201ENST00000553906 PHF23Q9BUL5 403 aaPredicted RBP12.03□□□□□ -0.48
TRAV37-201ENST00000553906 SENP3Q9H4L4 574 aaPredicted RBP11.7□□□□□ -0.54
TRAV37-201ENST00000553906 PLPPR3Q6T4P5 718 aa11.19□□□□□ -0.62
TRAV37-201ENST00000553906 FOXD1Q16676 465 aa10.84□□□□□ -0.67
TRAV37-201ENST00000553906 ADRA2BP18089 450 aa10.58□□□□□ -0.72
TRAV37-201ENST00000553906 PPP6R1Q9UPN7 881 aa10.57□□□□□ -0.72
TRAV37-201ENST00000553906 PIAS4Q8N2W9 510 aaPredicted RBP10.27□□□□□ -0.77
TRAV37-201ENST00000553906 POTEDQ86YR6 584 aa10.1□□□□□ -0.79
TRAV37-201ENST00000553906 MSH5O43196 834 aa9.93□□□□□ -0.82
TRAV37-201ENST00000553906 PPP4R3CPQ6ZMV5 832 aa9.89□□□□□ -0.83
TRAV37-201ENST00000553906 KCNA4P22459 653 aa9.85□□□□□ -0.83
TRAV37-201ENST00000553906 NCBP3Q53F19 620 aaKnown RBP9.7□□□□□ -0.86
TRAV37-201ENST00000553906 SCAF1Q9H7N4 1312 aaKnown RBP9.7□□□□□ -0.86
TRAV37-201ENST00000553906 CNKSR2Q8WXI2 1034 aa9.57□□□□□ -0.88
TRAV37-201ENST00000553906 MAPK8IP2Q13387 824 aaPredicted RBP9.56□□□□□ -0.88
TRAV37-201ENST00000553906 NPM3O75607 178 aaKnown RBP9.52□□□□□ -0.89
TRAV37-201ENST00000553906 SLC4A1APQ9BWU0 796 aaKnown RBP9.43□□□□□ -0.9
TRAV37-201ENST00000553906 EHMT2Q96KQ7 1210 aa9.37□□□□□ -0.91
TRAV37-201ENST00000553906 DMRT2Q9Y5R5 561 aa9.36□□□□□ -0.91
TRAV37-201ENST00000553906 RNF216Q9NWF9 866 aaPredicted RBP9.33□□□□□ -0.92
TRAV37-201ENST00000553906 HOXD11P31277 338 aaPredicted RBP9.23□□□□□ -0.93
TRAV37-201ENST00000553906 DNAJC5BQ9UF47 199 aa9.18□□□□□ -0.94
TRAV37-201ENST00000553906 CSRNP3Q8WYN3 585 aa9.17□□□□□ -0.94
TRAV37-201ENST00000553906 ZBTB22O15209 634 aa9.04□□□□□ -0.96
TRAV37-201ENST00000553906 FOXD4L1Q9NU39 408 aa9.02□□□□□ -0.97
TRAV37-201ENST00000553906 DCAF8L1A6NGE4 600 aa9□□□□□ -0.97
TRAV37-201ENST00000553906 SLC4A2P04920 1241 aa8.95□□□□□ -0.98
TRAV37-201ENST00000553906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.84□□□□□ -0.99
TRAV37-201ENST00000553906 MYCNP04198 464 aaPredicted RBP8.8□□□□□ -1
TRAV37-201ENST00000553906 ATXN8OSP0DMR3 200 aa8.68□□□□□ -1.02
TRAV37-201ENST00000553906 U3KPZ7 1027 aaPredicted RBP8.68□□□□□ -1.02
TRAV37-201ENST00000553906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.66□□□□□ -1.02
TRAV37-201ENST00000553906 HNRNPUL2Q1KMD3 747 aaKnown RBP8.66□□□□□ -1.02
TRAV37-201ENST00000553906 CACNB1Q02641 598 aaPredicted RBP8.64□□□□□ -1.03
TRAV37-201ENST00000553906 SAMD1Q6SPF0 538 aaPredicted RBP8.63□□□□□ -1.03
TRAV37-201ENST00000553906 ATF5Q9Y2D1 282 aaPredicted RBP8.55□□□□□ -1.04
TRAV37-201ENST00000553906 APLP2Q06481 763 aa8.53□□□□□ -1.04
TRAV37-201ENST00000553906 RNF39Q9H2S5 420 aa8.51□□□□□ -1.05
TRAV37-201ENST00000553906 C1QBPQ07021 282 aaKnown RBP8.44□□□□□ -1.06
TRAV37-201ENST00000553906 ZNF219Q9P2Y4 722 aaPredicted RBP8.41□□□□□ -1.06
TRAV37-201ENST00000553906 SPINK5Q9NQ38 1064 aaPredicted RBP8.4□□□□□ -1.06
TRAV37-201ENST00000553906 TRHP20396 242 aaPredicted RBP8.39□□□□□ -1.07
TRAV37-201ENST00000553906 CAPN15O75808 1086 aa8.38□□□□□ -1.07
TRAV37-201ENST00000553906 POLA2Q14181 598 aa8.29□□□□□ -1.08
TRAV37-201ENST00000553906 FKBP8Q14318 412 aa8.29□□□□□ -1.08
TRAV37-201ENST00000553906 ABCB7O75027 752 aa8.22□□□□□ -1.09
TRAV37-201ENST00000553906 FBLN2P98095 1184 aa8.21□□□□□ -1.1
TRAV37-201ENST00000553906 MKRN4PQ13434 485 aaPredicted RBP8.18□□□□□ -1.1
TRAV37-201ENST00000553906 DSG3P32926 999 aa8.17□□□□□ -1.1
TRAV37-201ENST00000553906 ZBTB12Q9Y330 459 aaPredicted RBP8.14□□□□□ -1.11
TRAV37-201ENST00000553906 SPDYE4A6NLX3 237 aa8.11□□□□□ -1.11
TRAV37-201ENST00000553906 OSCARQ8IYS5 282 aa7.97□□□□□ -1.13
TRAV37-201ENST00000553906 ZNF692Q9BU19 519 aaPredicted RBP7.96□□□□□ -1.14
TRAV37-201ENST00000553906 PROM2Q8N271 834 aa7.95□□□□□ -1.14
TRAV37-201ENST00000553906 FBXO3Q9UK99 471 aa7.95□□□□□ -1.14
TRAV37-201ENST00000553906 SPDYE2BA6NHP3 402 aa7.94□□□□□ -1.14
TRAV37-201ENST00000553906 SPDYE6P0CI01 402 aa7.94□□□□□ -1.14
TRAV37-201ENST00000553906 SPDYE2Q495Y8 402 aa7.94□□□□□ -1.14
TRAV37-201ENST00000553906 POTEHQ6S545 545 aa7.88□□□□□ -1.15
TRAV37-201ENST00000553906 SSUH2Q9Y2M2 353 aa7.88□□□□□ -1.15
TRAV37-201ENST00000553906 AMER1Q5JTC6 1135 aaPredicted RBP7.86□□□□□ -1.15
TRAV37-201ENST00000553906 PABPN1Q86U42 306 aaKnown RBP eCLIP7.85□□□□□ -1.15
TRAV37-201ENST00000553906 RTN4Q9NQC3 1192 aaKnown RBP7.83□□□□□ -1.16
TRAV37-201ENST00000553906 VASPP50552 380 aaPredicted RBP7.81□□□□□ -1.16
TRAV37-201ENST00000553906 RBM42Q9BTD8 480 aaKnown RBP7.79□□□□□ -1.16
TRAV37-201ENST00000553906 STAG3Q9UJ98 1225 aa7.78□□□□□ -1.16
TRAV37-201ENST00000553906 AKT1S1Q96B36 256 aa7.74□□□□□ -1.17
TRAV37-201ENST00000553906 IFNLR1Q8IU57 520 aaPredicted RBP7.73□□□□□ -1.17
TRAV37-201ENST00000553906 MIER1Q8N108 512 aa7.7□□□□□ -1.18
TRAV37-201ENST00000553906 PLCD3Q8N3E9 789 aa7.7□□□□□ -1.18
TRAV37-201ENST00000553906 KLHL34Q8N239 644 aa7.69□□□□□ -1.18
TRAV37-201ENST00000553906 SPDYE1Q8NFV5 336 aaPredicted RBP7.68□□□□□ -1.18
TRAV37-201ENST00000553906 REM2Q8IYK8 340 aaPredicted RBP7.66□□□□□ -1.18
TRAV37-201ENST00000553906 PLEKHG5O94827 1062 aa7.65□□□□□ -1.18
TRAV37-201ENST00000553906 CLEC11AQ9Y240 323 aa7.65□□□□□ -1.18
TRAV37-201ENST00000553906 SPOCK2Q92563 424 aa7.63□□□□□ -1.19
TRAV37-201ENST00000553906 PRR29P0C7W0 189 aa7.61□□□□□ -1.19
TRAV37-201ENST00000553906 ZBTB47Q9UFB7 747 aaPredicted RBP7.59□□□□□ -1.19
TRAV37-201ENST00000553906 PITPNM1O00562 1244 aa7.55□□□□□ -1.2
TRAV37-201ENST00000553906 PKD2Q13563 968 aa7.53□□□□□ -1.2
TRAV37-201ENST00000553906 CREBZFQ9NS37 354 aa7.52□□□□□ -1.21
TRAV37-201ENST00000553906 CIZ1Q9ULV3 898 aaPredicted RBP7.5□□□□□ -1.21
TRAV37-201ENST00000553906 ECM2O94769 699 aaPredicted RBP7.48□□□□□ -1.21
TRAV37-201ENST00000553906 DCAF8L2P0C7V8 631 aa7.48□□□□□ -1.21
TRAV37-201ENST00000553906 MNX1P50219 401 aaPredicted RBP7.44□□□□□ -1.22
TRAV37-201ENST00000553906 NUBP1P53384 320 aa7.44□□□□□ -1.22
TRAV37-201ENST00000553906 DCAF8Q5TAQ9 597 aa7.44□□□□□ -1.22
TRAV37-201ENST00000553906 NPM1P06748 294 aaKnown RBP eCLIP7.43□□□□□ -1.22
TRAV37-201ENST00000553906 GSE1Q14687 1217 aa7.43□□□□□ -1.22
TRAV37-201ENST00000553906 CHADLQ6NUI6 762 aa7.42□□□□□ -1.22
TRAV37-201ENST00000553906 TRIM41Q8WV44 630 aa7.4□□□□□ -1.22
TRAV37-201ENST00000553906 PRKAR2AP13861 404 aaKnown RBP7.39□□□□□ -1.23
TRAV37-201ENST00000553906 CHRDL2Q6WN34 429 aa7.39□□□□□ -1.23
TRAV37-201ENST00000553906 FAM212AQ96EL1 285 aa7.39□□□□□ -1.23
TRAV37-201ENST00000553906 RGL2O15211 777 aa7.38□□□□□ -1.23
TRAV37-201ENST00000553906 SLC24A1O60721 1099 aa7.38□□□□□ -1.23
TRAV37-201ENST00000553906 FXR2P51116 673 aaKnown RBP eCLIP7.38□□□□□ -1.23
TRAV37-201ENST00000553906 FARP1Q9Y4F1 1045 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms