RNA–Protein interactions for RNA: ENST00000365553.1

RNU6-827P-201, Transcript of RNA, U6 small nuclear 827, pseudogene, humanhuman

BASIC

Gene RNU6-827P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-827P-201ENST00000365553 AEBP2Q6ZN18 517 aaPredicted RBP14.21□□□□□ -0.13
RNU6-827P-201ENST00000365553 CHIC1Q5VXU3 224 aa14□□□□□ -0.17
RNU6-827P-201ENST00000365553 PHF23Q9BUL5 403 aaPredicted RBP12.26□□□□□ -0.45
RNU6-827P-201ENST00000365553 SENP3Q9H4L4 574 aaPredicted RBP12.15□□□□□ -0.46
RNU6-827P-201ENST00000365553 PLPPR3Q6T4P5 718 aa11.42□□□□□ -0.58
RNU6-827P-201ENST00000365553 FOXD1Q16676 465 aa11.2□□□□□ -0.62
RNU6-827P-201ENST00000365553 ADRA2BP18089 450 aa10.79□□□□□ -0.68
RNU6-827P-201ENST00000365553 PPP6R1Q9UPN7 881 aa10.79□□□□□ -0.68
RNU6-827P-201ENST00000365553 PIAS4Q8N2W9 510 aaPredicted RBP10.61□□□□□ -0.71
RNU6-827P-201ENST00000365553 MSH5O43196 834 aa10.39□□□□□ -0.75
RNU6-827P-201ENST00000365553 PPP4R3CPQ6ZMV5 832 aa10.04□□□□□ -0.8
RNU6-827P-201ENST00000365553 SCAF1Q9H7N4 1312 aaKnown RBP9.99□□□□□ -0.81
RNU6-827P-201ENST00000365553 NCBP3Q53F19 620 aaKnown RBP9.86□□□□□ -0.83
RNU6-827P-201ENST00000365553 KCNA4P22459 653 aa9.83□□□□□ -0.84
RNU6-827P-201ENST00000365553 CNKSR2Q8WXI2 1034 aa9.77□□□□□ -0.85
RNU6-827P-201ENST00000365553 MAPK8IP2Q13387 824 aaPredicted RBP9.76□□□□□ -0.85
RNU6-827P-201ENST00000365553 DMRT2Q9Y5R5 561 aa9.68□□□□□ -0.86
RNU6-827P-201ENST00000365553 NPM3O75607 178 aaKnown RBP9.63□□□□□ -0.87
RNU6-827P-201ENST00000365553 RNF216Q9NWF9 866 aaPredicted RBP9.57□□□□□ -0.88
RNU6-827P-201ENST00000365553 HOXD11P31277 338 aaPredicted RBP9.51□□□□□ -0.89
RNU6-827P-201ENST00000365553 DNAJC5BQ9UF47 199 aa9.42□□□□□ -0.9
RNU6-827P-201ENST00000365553 SLC4A1APQ9BWU0 796 aaKnown RBP9.41□□□□□ -0.9
RNU6-827P-201ENST00000365553 POTEDQ86YR6 584 aa9.3□□□□□ -0.92
RNU6-827P-201ENST00000365553 DCAF8L1A6NGE4 600 aa9.24□□□□□ -0.93
RNU6-827P-201ENST00000365553 EHMT2Q96KQ7 1210 aa9.16□□□□□ -0.94
RNU6-827P-201ENST00000365553 FOXD4L1Q9NU39 408 aa9.08□□□□□ -0.96
RNU6-827P-201ENST00000365553 SLC4A2P04920 1241 aa9.07□□□□□ -0.96
RNU6-827P-201ENST00000365553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.06□□□□□ -0.96
RNU6-827P-201ENST00000365553 CSRNP3Q8WYN3 585 aa9.03□□□□□ -0.96
RNU6-827P-201ENST00000365553 ZBTB22O15209 634 aa9.02□□□□□ -0.97
RNU6-827P-201ENST00000365553 MYCNP04198 464 aaPredicted RBP8.94□□□□□ -0.98
RNU6-827P-201ENST00000365553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.89□□□□□ -0.99
RNU6-827P-201ENST00000365553 HNRNPUL2Q1KMD3 747 aaKnown RBP8.89□□□□□ -0.99
RNU6-827P-201ENST00000365553 U3KPZ7 1027 aaPredicted RBP8.88□□□□□ -0.99
RNU6-827P-201ENST00000365553 RNF39Q9H2S5 420 aa8.87□□□□□ -0.99
RNU6-827P-201ENST00000365553 SAMD1Q6SPF0 538 aaPredicted RBP8.84□□□□□ -0.99
RNU6-827P-201ENST00000365553 APLP2Q06481 763 aa8.81□□□□□ -1
RNU6-827P-201ENST00000365553 ATXN8OSP0DMR3 200 aa8.8□□□□□ -1
RNU6-827P-201ENST00000365553 C1QBPQ07021 282 aaKnown RBP8.8□□□□□ -1
RNU6-827P-201ENST00000365553 ZNF219Q9P2Y4 722 aaPredicted RBP8.62□□□□□ -1.03
RNU6-827P-201ENST00000365553 CAPN15O75808 1086 aa8.61□□□□□ -1.03
RNU6-827P-201ENST00000365553 ATF5Q9Y2D1 282 aaPredicted RBP8.61□□□□□ -1.03
RNU6-827P-201ENST00000365553 CACNB1Q02641 598 aaPredicted RBP8.6□□□□□ -1.03
RNU6-827P-201ENST00000365553 SPINK5Q9NQ38 1064 aaPredicted RBP8.6□□□□□ -1.03
RNU6-827P-201ENST00000365553 TRHP20396 242 aaPredicted RBP8.56□□□□□ -1.04
RNU6-827P-201ENST00000365553 DSG3P32926 999 aa8.44□□□□□ -1.06
RNU6-827P-201ENST00000365553 POLA2Q14181 598 aa8.44□□□□□ -1.06
RNU6-827P-201ENST00000365553 ABCB7O75027 752 aa8.41□□□□□ -1.06
RNU6-827P-201ENST00000365553 ZBTB12Q9Y330 459 aaPredicted RBP8.4□□□□□ -1.06
RNU6-827P-201ENST00000365553 FBLN2P98095 1184 aa8.36□□□□□ -1.07
RNU6-827P-201ENST00000365553 MKRN4PQ13434 485 aaPredicted RBP8.26□□□□□ -1.09
RNU6-827P-201ENST00000365553 FKBP8Q14318 412 aa8.18□□□□□ -1.1
RNU6-827P-201ENST00000365553 SPDYE4A6NLX3 237 aa8.15□□□□□ -1.1
RNU6-827P-201ENST00000365553 OSCARQ8IYS5 282 aa8.14□□□□□ -1.11
RNU6-827P-201ENST00000365553 SPDYE2BA6NHP3 402 aa8.13□□□□□ -1.11
RNU6-827P-201ENST00000365553 SPDYE6P0CI01 402 aa8.13□□□□□ -1.11
RNU6-827P-201ENST00000365553 SPDYE2Q495Y8 402 aa8.13□□□□□ -1.11
RNU6-827P-201ENST00000365553 RBM42Q9BTD8 480 aaKnown RBP8.11□□□□□ -1.11
RNU6-827P-201ENST00000365553 ZNF692Q9BU19 519 aaPredicted RBP8.08□□□□□ -1.12
RNU6-827P-201ENST00000365553 SSUH2Q9Y2M2 353 aa8.05□□□□□ -1.12
RNU6-827P-201ENST00000365553 PROM2Q8N271 834 aa8.03□□□□□ -1.12
RNU6-827P-201ENST00000365553 AKT1S1Q96B36 256 aa8□□□□□ -1.13
RNU6-827P-201ENST00000365553 PABPN1Q86U42 306 aaKnown RBP eCLIP7.97□□□□□ -1.13
RNU6-827P-201ENST00000365553 FBXO3Q9UK99 471 aa7.96□□□□□ -1.14
RNU6-827P-201ENST00000365553 STAG3Q9UJ98 1225 aa7.91□□□□□ -1.14
RNU6-827P-201ENST00000365553 REM2Q8IYK8 340 aaPredicted RBP7.89□□□□□ -1.15
RNU6-827P-201ENST00000365553 SPDYE1Q8NFV5 336 aaPredicted RBP7.89□□□□□ -1.15
RNU6-827P-201ENST00000365553 CLEC11AQ9Y240 323 aa7.8□□□□□ -1.16
RNU6-827P-201ENST00000365553 PITPNM1O00562 1244 aa7.79□□□□□ -1.16
RNU6-827P-201ENST00000365553 VASPP50552 380 aaPredicted RBP7.79□□□□□ -1.16
RNU6-827P-201ENST00000365553 PRR29P0C7W0 189 aa7.76□□□□□ -1.17
RNU6-827P-201ENST00000365553 PLEKHG5O94827 1062 aa7.75□□□□□ -1.17
RNU6-827P-201ENST00000365553 MIER1Q8N108 512 aa7.73□□□□□ -1.17
RNU6-827P-201ENST00000365553 PLCD3Q8N3E9 789 aa7.73□□□□□ -1.17
RNU6-827P-201ENST00000365553 CHRDL2Q6WN34 429 aa7.71□□□□□ -1.18
RNU6-827P-201ENST00000365553 ZBTB47Q9UFB7 747 aaPredicted RBP7.7□□□□□ -1.18
RNU6-827P-201ENST00000365553 IFNLR1Q8IU57 520 aaPredicted RBP7.66□□□□□ -1.18
RNU6-827P-201ENST00000365553 FXR2P51116 673 aaKnown RBP eCLIP7.65□□□□□ -1.18
RNU6-827P-201ENST00000365553 KLHL34Q8N239 644 aa7.65□□□□□ -1.18
RNU6-827P-201ENST00000365553 CREBZFQ9NS37 354 aa7.65□□□□□ -1.18
RNU6-827P-201ENST00000365553 PRKAR2AP13861 404 aaKnown RBP7.6□□□□□ -1.19
RNU6-827P-201ENST00000365553 AMER1Q5JTC6 1135 aaPredicted RBP7.6□□□□□ -1.19
RNU6-827P-201ENST00000365553 SPOCK2Q92563 424 aa7.6□□□□□ -1.19
RNU6-827P-201ENST00000365553 NPM1P06748 294 aaKnown RBP eCLIP7.59□□□□□ -1.19
RNU6-827P-201ENST00000365553 PIP4P2Q8N4L2 257 aa7.59□□□□□ -1.19
RNU6-827P-201ENST00000365553 MNX1P50219 401 aaPredicted RBP7.57□□□□□ -1.2
RNU6-827P-201ENST00000365553 CHADLQ6NUI6 762 aa7.57□□□□□ -1.2
RNU6-827P-201ENST00000365553 FARP1Q9Y4F1 1045 aaPredicted RBP7.56□□□□□ -1.2
RNU6-827P-201ENST00000365553 NUBP1P53384 320 aa7.51□□□□□ -1.21
RNU6-827P-201ENST00000365553 RTN4Q9NQC3 1192 aaKnown RBP7.5□□□□□ -1.21
RNU6-827P-201ENST00000365553 GSE1Q14687 1217 aa7.49□□□□□ -1.21
RNU6-827P-201ENST00000365553 FAM212AQ96EL1 285 aa7.49□□□□□ -1.21
RNU6-827P-201ENST00000365553 TRIM41Q8WV44 630 aa7.46□□□□□ -1.22
RNU6-827P-201ENST00000365553 CIZ1Q9ULV3 898 aaPredicted RBP7.46□□□□□ -1.22
RNU6-827P-201ENST00000365553 PAK3O75914 559 aaPredicted RBP7.45□□□□□ -1.22
RNU6-827P-201ENST00000365553 DCAF8Q5TAQ9 597 aa7.45□□□□□ -1.22
RNU6-827P-201ENST00000365553 RASEFQ8IZ41 740 aa7.45□□□□□ -1.22
RNU6-827P-201ENST00000365553 PKD2Q13563 968 aa7.42□□□□□ -1.22
RNU6-827P-201ENST00000365553 TSPYL2Q9H2G4 693 aaPredicted RBP7.4□□□□□ -1.22
RNU6-827P-201ENST00000365553 ECM2O94769 699 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms