RNA–Protein interactions for RNA: ENST00000550658.1

SYF2P1-201, Transcript of SYF2 pre-mRNA splicing factor pseudogene 1, humanhuman

BASIC

Gene SYF2P1, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2P1-201ENST00000550658 AEBP2Q6ZN18 517 aaPredicted RBP16.15■□□□□ 0.18
SYF2P1-201ENST00000550658 CHIC1Q5VXU3 224 aa15.44■□□□□ 0.06
SYF2P1-201ENST00000550658 SENP3Q9H4L4 574 aaPredicted RBP13.78□□□□□ -0.2
SYF2P1-201ENST00000550658 PHF23Q9BUL5 403 aaPredicted RBP13.6□□□□□ -0.23
SYF2P1-201ENST00000550658 POTEDQ86YR6 584 aa13.37□□□□□ -0.27
SYF2P1-201ENST00000550658 FOXD1Q16676 465 aa12.81□□□□□ -0.36
SYF2P1-201ENST00000550658 MSH5O43196 834 aa12.43□□□□□ -0.42
SYF2P1-201ENST00000550658 PLPPR3Q6T4P5 718 aa12.39□□□□□ -0.43
SYF2P1-201ENST00000550658 PPP6R1Q9UPN7 881 aa12.05□□□□□ -0.48
SYF2P1-201ENST00000550658 ADRA2BP18089 450 aa12.02□□□□□ -0.49
SYF2P1-201ENST00000550658 PIAS4Q8N2W9 510 aaPredicted RBP12.01□□□□□ -0.49
SYF2P1-201ENST00000550658 CACNB1Q02641 598 aaPredicted RBP11.15□□□□□ -0.62
SYF2P1-201ENST00000550658 SCAF1Q9H7N4 1312 aaKnown RBP11.02□□□□□ -0.65
SYF2P1-201ENST00000550658 MAPK8IP2Q13387 824 aaPredicted RBP11.01□□□□□ -0.65
SYF2P1-201ENST00000550658 DMRT2Q9Y5R5 561 aa10.94□□□□□ -0.66
SYF2P1-201ENST00000550658 PPP4R3CPQ6ZMV5 832 aa10.86□□□□□ -0.67
SYF2P1-201ENST00000550658 CNKSR2Q8WXI2 1034 aa10.64□□□□□ -0.71
SYF2P1-201ENST00000550658 HOXD11P31277 338 aaPredicted RBP10.57□□□□□ -0.72
SYF2P1-201ENST00000550658 RNF216Q9NWF9 866 aaPredicted RBP10.53□□□□□ -0.72
SYF2P1-201ENST00000550658 NCBP3Q53F19 620 aaKnown RBP10.49□□□□□ -0.73
SYF2P1-201ENST00000550658 DCAF8L1A6NGE4 600 aa10.48□□□□□ -0.73
SYF2P1-201ENST00000550658 RNF39Q9H2S5 420 aa10.44□□□□□ -0.74
SYF2P1-201ENST00000550658 POTEHQ6S545 545 aa10.37□□□□□ -0.75
SYF2P1-201ENST00000550658 NPM3O75607 178 aaKnown RBP10.34□□□□□ -0.75
SYF2P1-201ENST00000550658 C1QBPQ07021 282 aaKnown RBP10.31□□□□□ -0.76
SYF2P1-201ENST00000550658 KCNA4P22459 653 aa10.22□□□□□ -0.77
SYF2P1-201ENST00000550658 DNAJC5BQ9UF47 199 aa10.2□□□□□ -0.78
SYF2P1-201ENST00000550658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.08□□□□□ -0.8
SYF2P1-201ENST00000550658 U3KPZ7 1027 aaPredicted RBP9.87□□□□□ -0.83
SYF2P1-201ENST00000550658 SLC4A2P04920 1241 aa9.83□□□□□ -0.84
SYF2P1-201ENST00000550658 SPINK5Q9NQ38 1064 aaPredicted RBP9.7□□□□□ -0.86
SYF2P1-201ENST00000550658 CAPN15O75808 1086 aa9.68□□□□□ -0.86
SYF2P1-201ENST00000550658 SLC4A1APQ9BWU0 796 aaKnown RBP9.67□□□□□ -0.86
SYF2P1-201ENST00000550658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.65□□□□□ -0.86
SYF2P1-201ENST00000550658 HNRNPUL2Q1KMD3 747 aaKnown RBP9.65□□□□□ -0.86
SYF2P1-201ENST00000550658 APLP2Q06481 763 aa9.62□□□□□ -0.87
SYF2P1-201ENST00000550658 DSG3P32926 999 aa9.61□□□□□ -0.87
SYF2P1-201ENST00000550658 SAMD1Q6SPF0 538 aaPredicted RBP9.59□□□□□ -0.87
SYF2P1-201ENST00000550658 MYCNP04198 464 aaPredicted RBP9.56□□□□□ -0.88
SYF2P1-201ENST00000550658 TRHP20396 242 aaPredicted RBP9.55□□□□□ -0.88
SYF2P1-201ENST00000550658 ZNF219Q9P2Y4 722 aaPredicted RBP9.55□□□□□ -0.88
SYF2P1-201ENST00000550658 FOXD4L1Q9NU39 408 aa9.52□□□□□ -0.89
SYF2P1-201ENST00000550658 ABCB7O75027 752 aa9.45□□□□□ -0.9
SYF2P1-201ENST00000550658 ZBTB22O15209 634 aa9.39□□□□□ -0.91
SYF2P1-201ENST00000550658 SP7Q8TDD2 431 aaPredicted RBP9.35□□□□□ -0.91
SYF2P1-201ENST00000550658 POLA2Q14181 598 aa9.31□□□□□ -0.92
SYF2P1-201ENST00000550658 ATF5Q9Y2D1 282 aaPredicted RBP9.31□□□□□ -0.92
SYF2P1-201ENST00000550658 CHRDL2Q6WN34 429 aa9.26□□□□□ -0.93
SYF2P1-201ENST00000550658 RBM42Q9BTD8 480 aaKnown RBP9.23□□□□□ -0.93
SYF2P1-201ENST00000550658 ATXN8OSP0DMR3 200 aa9.21□□□□□ -0.94
SYF2P1-201ENST00000550658 ZBTB12Q9Y330 459 aaPredicted RBP9.15□□□□□ -0.94
SYF2P1-201ENST00000550658 CSRNP3Q8WYN3 585 aa9.06□□□□□ -0.96
SYF2P1-201ENST00000550658 OSCARQ8IYS5 282 aa9.01□□□□□ -0.97
SYF2P1-201ENST00000550658 EHMT2Q96KQ7 1210 aa9□□□□□ -0.97
SYF2P1-201ENST00000550658 HAX1O00165 279 aa8.98□□□□□ -0.97
SYF2P1-201ENST00000550658 AKT1S1Q96B36 256 aa8.98□□□□□ -0.97
SYF2P1-201ENST00000550658 FBLN2P98095 1184 aa8.96□□□□□ -0.98
SYF2P1-201ENST00000550658 PLSCR2Q9NRY7 297 aa8.95□□□□□ -0.98
SYF2P1-201ENST00000550658 MKRN4PQ13434 485 aaPredicted RBP8.9□□□□□ -0.98
SYF2P1-201ENST00000550658 REM2Q8IYK8 340 aaPredicted RBP8.89□□□□□ -0.99
SYF2P1-201ENST00000550658 SPDYE2BA6NHP3 402 aa8.87□□□□□ -0.99
SYF2P1-201ENST00000550658 SPDYE6P0CI01 402 aa8.87□□□□□ -0.99
SYF2P1-201ENST00000550658 SPDYE2Q495Y8 402 aa8.87□□□□□ -0.99
SYF2P1-201ENST00000550658 PIP4P2Q8N4L2 257 aa8.83□□□□□ -1
SYF2P1-201ENST00000550658 PITPNM1O00562 1244 aa8.78□□□□□ -1
SYF2P1-201ENST00000550658 LHX8Q68G74 356 aa8.77□□□□□ -1.01
SYF2P1-201ENST00000550658 ZNF692Q9BU19 519 aaPredicted RBP8.77□□□□□ -1.01
SYF2P1-201ENST00000550658 SSUH2Q9Y2M2 353 aa8.76□□□□□ -1.01
SYF2P1-201ENST00000550658 FXR2P51116 673 aaKnown RBP eCLIP8.69□□□□□ -1.02
SYF2P1-201ENST00000550658 SPDYE1Q8NFV5 336 aaPredicted RBP8.69□□□□□ -1.02
SYF2P1-201ENST00000550658 CLEC11AQ9Y240 323 aa8.67□□□□□ -1.02
SYF2P1-201ENST00000550658 PABPN1Q86U42 306 aaKnown RBP eCLIP8.65□□□□□ -1.02
SYF2P1-201ENST00000550658 EVX2Q03828 476 aa8.62□□□□□ -1.03
SYF2P1-201ENST00000550658 PRKAR2AP13861 404 aaKnown RBP8.57□□□□□ -1.04
SYF2P1-201ENST00000550658 SPDYE4A6NLX3 237 aa8.54□□□□□ -1.04
SYF2P1-201ENST00000550658 PRR29P0C7W0 189 aa8.54□□□□□ -1.04
SYF2P1-201ENST00000550658 CHADLQ6NUI6 762 aa8.48□□□□□ -1.05
SYF2P1-201ENST00000550658 GABBR2O75899 941 aa8.47□□□□□ -1.05
SYF2P1-201ENST00000550658 STAG3Q9UJ98 1225 aa8.44□□□□□ -1.06
SYF2P1-201ENST00000550658 C19orf67A6NJJ6 358 aa8.41□□□□□ -1.06
SYF2P1-201ENST00000550658 FARP1Q9Y4F1 1045 aaPredicted RBP8.37□□□□□ -1.07
SYF2P1-201ENST00000550658 PROM2Q8N271 834 aa8.34□□□□□ -1.07
SYF2P1-201ENST00000550658 CREBZFQ9NS37 354 aa8.34□□□□□ -1.07
SYF2P1-201ENST00000550658 POTEMA6NI47 508 aa8.3□□□□□ -1.08
SYF2P1-201ENST00000550658 CD44P16070 742 aaKnown RBP8.3□□□□□ -1.08
SYF2P1-201ENST00000550658 PCDH10Q9P2E7 1040 aa8.29□□□□□ -1.08
SYF2P1-201ENST00000550658 POTEGQ6S5H5 508 aa8.24□□□□□ -1.09
SYF2P1-201ENST00000550658 MNX1P50219 401 aaPredicted RBP8.22□□□□□ -1.09
SYF2P1-201ENST00000550658 FKBP8Q14318 412 aa8.22□□□□□ -1.09
SYF2P1-201ENST00000550658 NPM1P06748 294 aaKnown RBP eCLIP8.21□□□□□ -1.1
SYF2P1-201ENST00000550658 POTEIP0CG38 1075 aa8.2□□□□□ -1.1
SYF2P1-201ENST00000550658 CLCN6P51797 869 aa8.2□□□□□ -1.1
SYF2P1-201ENST00000550658 DCBLD2Q96PD2 775 aa8.2□□□□□ -1.1
SYF2P1-201ENST00000550658 ZRANB1Q9UGI0 708 aa8.19□□□□□ -1.1
SYF2P1-201ENST00000550658 PAK3O75914 559 aaPredicted RBP8.17□□□□□ -1.1
SYF2P1-201ENST00000550658 ZNF579Q8NAF0 562 aaKnown RBP8.17□□□□□ -1.1
SYF2P1-201ENST00000550658 PLEKHG5O94827 1062 aa8.13□□□□□ -1.11
SYF2P1-201ENST00000550658 MIER1Q8N108 512 aa8.13□□□□□ -1.11
SYF2P1-201ENST00000550658 OTUD5Q96G74 571 aa8.11□□□□□ -1.11
SYF2P1-201ENST00000550658 PLCD3Q8N3E9 789 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms