RNA–Protein interactions for RNA: ENST00000539310.5

PLS3-209, Transcript of plastin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLS3, Length 3,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-209ENST00000539310 AEBP2Q6ZN18 517 aaPredicted RBP10.02□□□□□ -0.81
PLS3-209ENST00000539310 CHIC1Q5VXU3 224 aa9.75□□□□□ -0.85
PLS3-209ENST00000539310 PHF23Q9BUL5 403 aaPredicted RBP8.75□□□□□ -1.01
PLS3-209ENST00000539310 SENP3Q9H4L4 574 aaPredicted RBP8.24□□□□□ -1.09
PLS3-209ENST00000539310 NISCHQ9Y2I1 1504 aa8.16□□□□□ -1.1
PLS3-209ENST00000539310 PLPPR3Q6T4P5 718 aa7.94□□□□□ -1.14
PLS3-209ENST00000539310 FOXD1Q16676 465 aa7.8□□□□□ -1.16
PLS3-209ENST00000539310 PPP6R1Q9UPN7 881 aa7.75□□□□□ -1.17
PLS3-209ENST00000539310 ADRA2BP18089 450 aa7.73□□□□□ -1.17
PLS3-209ENST00000539310 HRCP23327 699 aa7.64□□□□□ -1.19
PLS3-209ENST00000539310 PCGF6Q9BYE7 350 aa7.54□□□□□ -1.2
PLS3-209ENST00000539310 SUPT5HO00267 1087 aaKnown RBP7.53□□□□□ -1.2
PLS3-209ENST00000539310 MYT1Q01538 1121 aa7.53□□□□□ -1.2
PLS3-209ENST00000539310 PPARGC1BQ86YN6 1023 aaKnown RBP7.52□□□□□ -1.21
PLS3-209ENST00000539310 PELP1Q8IZL8 1130 aaKnown RBP7.5□□□□□ -1.21
PLS3-209ENST00000539310 SHROOM4Q9ULL8 1493 aa7.48□□□□□ -1.21
PLS3-209ENST00000539310 TTBK1Q5TCY1 1321 aaPredicted RBP7.44□□□□□ -1.22
PLS3-209ENST00000539310 SLC24A1O60721 1099 aa7.43□□□□□ -1.22
PLS3-209ENST00000539310 PIAS4Q8N2W9 510 aaPredicted RBP7.38□□□□□ -1.23
PLS3-209ENST00000539310 MYO15BQ96JP2 1530 aa7.28□□□□□ -1.24
PLS3-209ENST00000539310 SCAF1Q9H7N4 1312 aaKnown RBP7.26□□□□□ -1.25
PLS3-209ENST00000539310 KCNA4P22459 653 aa7.24□□□□□ -1.25
PLS3-209ENST00000539310 TRIM26Q12899 539 aaPredicted RBP7.23□□□□□ -1.25
PLS3-209ENST00000539310 LOC105371045A0A1W2PR82 267 aa7.22□□□□□ -1.25
PLS3-209ENST00000539310 ZEB1P37275 1124 aaPredicted RBP7.21□□□□□ -1.26
PLS3-209ENST00000539310 DCAF1Q9Y4B6 1507 aa7.15□□□□□ -1.26
PLS3-209ENST00000539310 DCAF8L2P0C7V8 631 aa7.11□□□□□ -1.27
PLS3-209ENST00000539310 PPP4R3CPQ6ZMV5 832 aa7.1□□□□□ -1.27
PLS3-209ENST00000539310 ACIN1Q9UKV3 1341 aaKnown RBP7.09□□□□□ -1.27
PLS3-209ENST00000539310 NEUROD1Q13562 356 aa7.07□□□□□ -1.28
PLS3-209ENST00000539310 POTEDQ86YR6 584 aa7.07□□□□□ -1.28
PLS3-209ENST00000539310 GTF3C3Q9Y5Q9 886 aa7.07□□□□□ -1.28
PLS3-209ENST00000539310 CENPBP07199 599 aaPredicted RBP7.06□□□□□ -1.28
PLS3-209ENST00000539310 APLP2Q06481 763 aa7.06□□□□□ -1.28
PLS3-209ENST00000539310 DAXXQ9UER7 740 aaPredicted RBP7.05□□□□□ -1.28
PLS3-209ENST00000539310 ERICH6Q7L0X2 663 aa7.02□□□□□ -1.29
PLS3-209ENST00000539310 CCDC180Q9P1Z9 1646 aa7.01□□□□□ -1.29
PLS3-209ENST00000539310 MAPK8IP2Q13387 824 aaPredicted RBP7.01□□□□□ -1.29
PLS3-209ENST00000539310 EHMT2Q96KQ7 1210 aa7.01□□□□□ -1.29
PLS3-209ENST00000539310 FAM9AQ8IZU1 332 aaPredicted RBP6.99□□□□□ -1.29
PLS3-209ENST00000539310 CCER1Q8TC90 406 aaPredicted RBP6.98□□□□□ -1.29
PLS3-209ENST00000539310 DIEXFQ68CQ4 756 aaKnown RBP6.97□□□□□ -1.29
PLS3-209ENST00000539310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.95□□□□□ -1.3
PLS3-209ENST00000539310 TRIM41Q8WV44 630 aa6.94□□□□□ -1.3
PLS3-209ENST00000539310 YTHDC1Q96MU7 727 aaKnown RBP6.93□□□□□ -1.3
PLS3-209ENST00000539310 ZCCHC6Q5VYS8 1495 aaKnown RBP6.93□□□□□ -1.3
PLS3-209ENST00000539310 PRKCSHP14314 528 aaPredicted RBP6.93□□□□□ -1.3
PLS3-209ENST00000539310 MSH5O43196 834 aa6.92□□□□□ -1.3
PLS3-209ENST00000539310 NPM3O75607 178 aaKnown RBP6.9□□□□□ -1.31
PLS3-209ENST00000539310 SLC4A1APQ9BWU0 796 aaKnown RBP6.81□□□□□ -1.32
PLS3-209ENST00000539310 ZNF316A6NFI3 1004 aaPredicted RBP6.8□□□□□ -1.32
PLS3-209ENST00000539310 NCBP3Q53F19 620 aaKnown RBP6.79□□□□□ -1.32
PLS3-209ENST00000539310 CNKSR2Q8WXI2 1034 aa6.77□□□□□ -1.33
PLS3-209ENST00000539310 MIER1Q8N108 512 aa6.76□□□□□ -1.33
PLS3-209ENST00000539310 BCL11AQ9H165 835 aa6.74□□□□□ -1.33
PLS3-209ENST00000539310 CSRNP3Q8WYN3 585 aa6.74□□□□□ -1.33
PLS3-209ENST00000539310 ANP32EQ9BTT0 268 aa6.72□□□□□ -1.33
PLS3-209ENST00000539310 ZBTB22O15209 634 aa6.71□□□□□ -1.34
PLS3-209ENST00000539310 SUPT16HQ9Y5B9 1047 aaKnown RBP6.68□□□□□ -1.34
PLS3-209ENST00000539310 HNRNPUL2Q1KMD3 747 aaKnown RBP6.66□□□□□ -1.34
PLS3-209ENST00000539310 TSHZ2Q9NRE2 1034 aa6.65□□□□□ -1.34
PLS3-209ENST00000539310 RSF1Q96T23 1441 aaPredicted RBP6.65□□□□□ -1.35
PLS3-209ENST00000539310 CLSPNQ9HAW4 1339 aa6.64□□□□□ -1.35
PLS3-209ENST00000539310 DMRT2Q9Y5R5 561 aa6.63□□□□□ -1.35
PLS3-209ENST00000539310 BCANQ96GW7 911 aa6.62□□□□□ -1.35
PLS3-209ENST00000539310 UBTFP17480 764 aaKnown RBP6.61□□□□□ -1.35
PLS3-209ENST00000539310 RNF216Q9NWF9 866 aaPredicted RBP6.58□□□□□ -1.36
PLS3-209ENST00000539310 RB1CC1Q8TDY2 1594 aa6.57□□□□□ -1.36
PLS3-209ENST00000539310 ARXQ96QS3 562 aa6.57□□□□□ -1.36
PLS3-209ENST00000539310 ABCC9O60706 1549 aa6.57□□□□□ -1.36
PLS3-209ENST00000539310 CEP162Q5TB80 1403 aa6.55□□□□□ -1.36
PLS3-209ENST00000539310 FKBP8Q14318 412 aa6.55□□□□□ -1.36
PLS3-209ENST00000539310 DCAF8L1A6NGE4 600 aa6.54□□□□□ -1.36
PLS3-209ENST00000539310 NEFLP07196 543 aa6.54□□□□□ -1.36
PLS3-209ENST00000539310 WRNQ14191 1432 aaPredicted RBP eCLIP6.53□□□□□ -1.36
PLS3-209ENST00000539310 HOXD11P31277 338 aaPredicted RBP6.53□□□□□ -1.36
PLS3-209ENST00000539310 RBM19Q9Y4C8 960 aaKnown RBP6.52□□□□□ -1.37
PLS3-209ENST00000539310 SLC4A2P04920 1241 aa6.51□□□□□ -1.37
PLS3-209ENST00000539310 RANGAP1P46060 587 aaPredicted RBP6.5□□□□□ -1.37
PLS3-209ENST00000539310 EIF5BO60841 1220 aaKnown RBP6.5□□□□□ -1.37
PLS3-209ENST00000539310 ITGAEP38570 1179 aa6.5□□□□□ -1.37
PLS3-209ENST00000539310 TNIKQ9UKE5 1360 aa6.49□□□□□ -1.37
PLS3-209ENST00000539310 KCNH8Q96L42 1107 aa6.48□□□□□ -1.37
PLS3-209ENST00000539310 SCRIBQ14160 1630 aa6.47□□□□□ -1.37
PLS3-209ENST00000539310 FOXD4L1Q9NU39 408 aa6.45□□□□□ -1.38
PLS3-209ENST00000539310 SOGA1O94964 1423 aa6.44□□□□□ -1.38
PLS3-209ENST00000539310 TRIM52Q96A61 297 aa6.44□□□□□ -1.38
PLS3-209ENST00000539310 CCDC88BA6NC98 1476 aa6.43□□□□□ -1.38
PLS3-209ENST00000539310 CECR2Q9BXF3 1484 aa6.43□□□□□ -1.38
PLS3-209ENST00000539310 DDX10Q13206 875 aaKnown RBP6.42□□□□□ -1.38
PLS3-209ENST00000539310 CDK11AQ9UQ88 783 aaPredicted RBP6.42□□□□□ -1.38
PLS3-209ENST00000539310 MROH2BQ7Z745 1585 aa6.4□□□□□ -1.39
PLS3-209ENST00000539310 DHX57Q6P158 1386 aaKnown RBP6.39□□□□□ -1.39
PLS3-209ENST00000539310 ABCC8Q09428 1581 aa6.39□□□□□ -1.39
PLS3-209ENST00000539310 MYT1LQ9UL68 1186 aa6.39□□□□□ -1.39
PLS3-209ENST00000539310 CLIP1P30622 1438 aa6.38□□□□□ -1.39
PLS3-209ENST00000539310 GOLGA3Q08378 1498 aa6.38□□□□□ -1.39
PLS3-209ENST00000539310 DEKP35659 375 aaKnown RBP6.38□□□□□ -1.39
PLS3-209ENST00000539310 EEA1Q15075 1411 aa6.38□□□□□ -1.39
PLS3-209ENST00000539310 ANP32CO43423 234 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms