Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 SNORD46-201ENST00000364043 104 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 RNU6-1051P-201ENST00000365471 102 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 PTMAP8-201ENST00000397729 342 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 MIR1184-2-201ENST00000408263 99 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 MIR1306-201ENST00000408439 85 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 MIR1184-1-201ENST00000408606 99 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 MIR1184-3-201ENST00000408676 99 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 AC064862.3-201ENST00000411435 571 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 Z98742.2-201ENST00000431564 187 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 AL354761.1-201ENST00000434190 526 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 AL357552.1-201ENST00000445254 415 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 RNU6-1041P-201ENST00000516254 102 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 RNA5SP468-201ENST00000516782 93 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 MRPL49P2-201ENST00000521066 465 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 MIR3938-201ENST00000582157 103 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 RN7SL301P-202ENST00000618767 298 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 AC048380.3-201ENST00000623145 796 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 MALAT1-202ENST00000534336 8708 ntBASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 LRRC37A6P-202ENST00000448648 5444 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 SNORD36A-201ENST00000362874 73 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 SNORA71D-201ENST00000363484 134 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 RACK1-201ENST00000376817 965 ntTSL 5 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 MIR124-3-201ENST00000384866 87 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 RN7SKP207-201ENST00000411204 303 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 AC006457.1-201ENST00000420733 392 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 MYL6BP1-201ENST00000429485 615 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 HMGN1P33-201ENST00000432945 451 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 AC009963.3-201ENST00000458090 486 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 RPL7AP6-201ENST00000477943 801 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 AC008496.1-201ENST00000509131 295 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 PPP1R1AP1-201ENST00000525622 425 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 AC120498.4-201ENST00000561649 320 ntTSL 3 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 MIR5195-201ENST00000583555 115 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 MIR4765-201ENST00000585007 77 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 AC087289.3-203ENST00000587556 550 ntAPPRIS P5 TSL 4 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 AL592227.1-201ENST00000614748 126 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 AC243994.1-201ENST00000618627 109 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 AC105046.1-201ENST00000566457 4997 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 AC107398.3-201ENST00000562284 7000 ntBASIC3.82□□□□□ -1.8
KRTAP3-3Q9BYR6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms