Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 HMGA1P5-201ENST00000412453 271 ntBASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
PCDHGA3Q9Y5H0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
PCDHGA3Q9Y5H0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA3Q9Y5H0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
PCDHGA3Q9Y5H0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 SLC25A1P2-201ENST00000430693 912 ntBASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 FAM207BP-201ENST00000447172 505 ntBASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 AC008040.2-201ENST00000461049 708 ntBASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 AC087388.1-201ENST00000571370 1112 ntBASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 AC116562.4-202ENST00000641738 218 ntBASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA3Q9Y5H0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 CCR12P-201ENST00000446203 998 ntBASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 LINC01238-205ENST00000567549 1107 ntBASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 WWOX-216ENST00000569818 525 ntBASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA3Q9Y5H0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 TMEM179-206ENST00000616017 1645 ntBASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 INGX-201ENST00000359239 846 ntBASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 MFAP1P1-201ENST00000442257 1255 ntBASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
PCDHGA3Q9Y5H0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms