Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB2Q9Y5E7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 NTF6B-201ENST00000591913 560 ntBASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHB2Q9Y5E7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 WWOX-216ENST00000569818 525 ntBASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 AC005332.7-201ENST00000614046 2005 ntBASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 ZNF815P-204ENST00000434898 1737 ntBASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHB2Q9Y5E7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 AK4P3-201ENST00000418260 669 ntBASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 PRSS44-201ENST00000515154 1146 ntBASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 AC007952.6-201ENST00000573168 2673 ntBASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 AC003957.1-201ENST00000625108 2673 ntBASIC20.85■□□□□ 0.93
PCDHB2Q9Y5E7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 AC117947.1-201ENST00000427448 529 ntBASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms