Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP3Q9Y446 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.15■□□□□ 0.66
PKP3Q9Y446 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP3Q9Y446 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP3Q9Y446 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP3Q9Y446 AL355355.2-201ENST00000442321 338 ntBASIC19.15■□□□□ 0.66
PKP3Q9Y446 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.15■□□□□ 0.66
PKP3Q9Y446 NUDT16P1-203ENST00000513809 620 ntBASIC19.15■□□□□ 0.66
PKP3Q9Y446 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.15■□□□□ 0.66
PKP3Q9Y446 MIR6786-201ENST00000616843 113 ntBASIC19.15■□□□□ 0.66
PKP3Q9Y446 AC011298.2-201ENST00000617989 482 ntBASIC19.15■□□□□ 0.66
PKP3Q9Y446 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.15■□□□□ 0.66
PKP3Q9Y446 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP3Q9Y446 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PKP3Q9Y446 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.15■□□□□ 0.66
PKP3Q9Y446 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PKP3Q9Y446 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.14■□□□□ 0.66
PKP3Q9Y446 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PKP3Q9Y446 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PKP3Q9Y446 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PKP3Q9Y446 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PKP3Q9Y446 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP3Q9Y446 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP3Q9Y446 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PKP3Q9Y446 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PKP3Q9Y446 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP3Q9Y446 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PKP3Q9Y446 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.14■□□□□ 0.65
PKP3Q9Y446 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PKP3Q9Y446 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.14■□□□□ 0.65
PKP3Q9Y446 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.14■□□□□ 0.65
PKP3Q9Y446 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.14■□□□□ 0.65
PKP3Q9Y446 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.14■□□□□ 0.65
PKP3Q9Y446 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.14■□□□□ 0.65
PKP3Q9Y446 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP3Q9Y446 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP3Q9Y446 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.14■□□□□ 0.65
PKP3Q9Y446 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PKP3Q9Y446 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.14■□□□□ 0.65
PKP3Q9Y446 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PKP3Q9Y446 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PKP3Q9Y446 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
PKP3Q9Y446 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PKP3Q9Y446 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PKP3Q9Y446 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP3Q9Y446 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP3Q9Y446 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP3Q9Y446 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PKP3Q9Y446 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PKP3Q9Y446 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.13■□□□□ 0.65
PKP3Q9Y446 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
PKP3Q9Y446 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.13■□□□□ 0.65
PKP3Q9Y446 B3GAT3P1-201ENST00000471720 806 ntBASIC19.13■□□□□ 0.65
PKP3Q9Y446 AC091390.4-202ENST00000476426 537 ntBASIC19.13■□□□□ 0.65
PKP3Q9Y446 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.13■□□□□ 0.65
PKP3Q9Y446 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.13■□□□□ 0.65
PKP3Q9Y446 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.13■□□□□ 0.65
PKP3Q9Y446 AC026471.5-201ENST00000615068 467 ntBASIC19.13■□□□□ 0.65
PKP3Q9Y446 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PKP3Q9Y446 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PKP3Q9Y446 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.13■□□□□ 0.65
PKP3Q9Y446 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP3Q9Y446 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PKP3Q9Y446 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP3Q9Y446 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP3Q9Y446 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP3Q9Y446 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP3Q9Y446 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PKP3Q9Y446 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP3Q9Y446 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PKP3Q9Y446 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP3Q9Y446 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PKP3Q9Y446 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.12■□□□□ 0.65
PKP3Q9Y446 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PKP3Q9Y446 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PKP3Q9Y446 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.12■□□□□ 0.65
PKP3Q9Y446 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP3Q9Y446 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP3Q9Y446 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PKP3Q9Y446 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PKP3Q9Y446 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.12■□□□□ 0.65
PKP3Q9Y446 TSPY23P-201ENST00000440136 739 ntBASIC19.12■□□□□ 0.65
PKP3Q9Y446 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP3Q9Y446 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.12■□□□□ 0.65
PKP3Q9Y446 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.12■□□□□ 0.65
PKP3Q9Y446 MIR4785-201ENST00000585005 73 ntBASIC19.12■□□□□ 0.65
PKP3Q9Y446 AC130371.2-201ENST00000619443 611 ntBASIC19.12■□□□□ 0.65
PKP3Q9Y446 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP3Q9Y446 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP3Q9Y446 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
PKP3Q9Y446 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PKP3Q9Y446 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PKP3Q9Y446 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PKP3Q9Y446 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.12■□□□□ 0.65
PKP3Q9Y446 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PKP3Q9Y446 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.12■□□□□ 0.65
PKP3Q9Y446 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.12■□□□□ 0.65
PKP3Q9Y446 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PKP3Q9Y446 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PKP3Q9Y446 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms