Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
RTCBQ9Y3I0 AL391807.1-203ENST00000604392 2365 ntBASIC24.08■■□□□ 1.44
RTCBQ9Y3I0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24.07■■□□□ 1.44
RTCBQ9Y3I0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
RTCBQ9Y3I0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC24.07■■□□□ 1.44
RTCBQ9Y3I0 AL022342.1-201ENST00000400363 863 ntBASIC24.07■■□□□ 1.44
RTCBQ9Y3I0 LINC00265-3P-201ENST00000447588 903 ntBASIC24.07■■□□□ 1.44
RTCBQ9Y3I0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
RTCBQ9Y3I0 AC023511.2-201ENST00000618803 211 ntBASIC24.07■■□□□ 1.44
RTCBQ9Y3I0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC24.07■■□□□ 1.44
RTCBQ9Y3I0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
RTCBQ9Y3I0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTCBQ9Y3I0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.07■■□□□ 1.44
RTCBQ9Y3I0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTCBQ9Y3I0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTCBQ9Y3I0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RTCBQ9Y3I0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 AC079781.3-201ENST00000449110 356 ntBASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 MIR3917-201ENST00000580971 93 ntBASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 AC112497.1-201ENST00000624824 639 ntBASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 AC073314.1-201ENST00000568729 2216 ntBASIC24.06■■□□□ 1.44
RTCBQ9Y3I0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 LINC01711-201ENST00000598340 967 ntBASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RTCBQ9Y3I0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 FOSL1P1-201ENST00000511041 816 ntBASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 AC012615.1-201ENST00000565797 1299 ntBASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 RNF126P1-202ENST00000569893 925 ntBASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC24.04■■□□□ 1.44
RTCBQ9Y3I0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 AC006538.3-201ENST00000612495 578 ntBASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 AC004263.2-201ENST00000617183 678 ntBASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms